RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C2orf81A6NN90 581 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 LPOP22079 712 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 MC4RP32245 332 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 GK3PQ14409 553 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 USP41Q3LFD5 358 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 UGT3A1Q6NUS8 523 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 ISLR2Q6UXK2 745 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 RAB44Q7Z6P3 723 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 DDIASQ8IXT1 998 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 FBXO39Q8N4B4 442 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 EFHBQ8N7U6 833 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 SIDT2Q8NBJ9 832 aaKnown RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 PDZD8Q8NEN9 1154 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 ESAMQ96AP7 390 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 KLF16Q9BXK1 252 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 MUC3BQ9H195 1237 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 RETREG1Q9H6L5 497 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 SMPD4Q9NXE4 827 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 POLG2Q9UHN1 485 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CROTQ9UKG9 612 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 ASB1Q9Y576 335 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 TIMM22Q9Y584 194 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 EME2A4GXA9 379 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 DENRO43583 198 aaKnown RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 TMCC1O94876 653 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 C1RP00736 705 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 C8BP07358 591 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CAPN3P20807 821 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 MZF1P28698 734 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 SLC7A2P52569 658 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 HK3P52790 923 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 ILF2Q12905 390 aaKnown RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 KIF19Q2TAC6 998 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 VPS26BQ4G0F5 336 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CYP2R1Q6VVX0 501 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CHST9Q7L1S5 443 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 TMEM126BQ8IUX1 230 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 RNF168Q8IYW5 571 aaPredicted RBP15.35■□□□□ 0.05
UPF3B-202ENST00000345865 OVCA2Q8WZ82 227 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 EID2BQ96D98 161 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 TCF12Q99081 682 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CCDC68Q9H2F9 335 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
UPF3B-202ENST00000345865 BTN3A1O00481 513 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 RPS17P08708 135 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CCL23P55773 120 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CDKL1Q00532 357 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 RAD51Q06609 339 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 LCP2Q13094 533 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 PLD1Q13393 1074 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 HACD2Q6Y1H2 254 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 LRRC43Q8N309 656 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 ADCY4Q8NFM4 1077 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 EEF1AKMT1Q8WVE0 214 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CCDC97Q96F63 343 aaPredicted RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 SLC22A12Q96S37 553 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 SPATS2LQ9NUQ6 558 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 TRPM5Q9NZQ8 1165 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 IQCF5A8MTL0 148 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 NR5A2O00482 541 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 HOXA2O43364 376 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 PKMP14618 531 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CHRM3P20309 590 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CHN2P52757 468 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 STX1BP61266 288 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 ZXDBP98169 803 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 RHDQ02161 417 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 MARVELD2Q8N4S9 558 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 FAM110BQ8TC76 370 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 CD200R1Q8TD46 325 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 NAT14Q8WUY8 206 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 TUBGCP3Q96CW5 907 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 MYRFLQ96LU7 910 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 TRAPPC9Q96Q05 1148 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 TSC22D3Q99576 134 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 GPATCH1Q9BRR8 931 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 SEMA6AQ9H2E6 1030 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 IL1RL2Q9HB29 575 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 SLC52A3Q9NQ40 469 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
UPF3B-202ENST00000345865 BACE2Q9Y5Z0 518 aa15.34■□□□□ 0.05
UPF3B-202ENST00000345865 C15orf38-AP3S2A0A0A6YYH1 394 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 ABLIM3O94929 683 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 HGFP14210 728 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 DIO3P55073 304 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 ATP6V0D1P61421 351 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 ANKS6Q68DC2 871 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 NCEH1Q6PIU2 408 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 ARPINQ7Z6K5 226 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 TMEM150AQ86TG1 271 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 SYVN1Q86TM6 617 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 ZNF461Q8TAF7 563 aa15.33■□□□□ 0.05
UPF3B-202ENST00000345865 WFDC5Q8TCV5 224 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms