RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LRRC8EQ6NSJ5 796 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 SDCCAG8Q86SQ7 713 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 FSTL5Q8N475 847 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 OR4L1Q8NH43 312 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 FIBINQ8TAL6 211 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 HEXDCQ8WVB3 486 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ZSWIM3Q96MP5 696 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 TSNARE1Q96NA8 513 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CATSPERZQ9NTU4 200 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 PNPOQ9NVS9 261 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 NLE1Q9NVX2 485 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ZFP69BQ9UJL9 534 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 BLOC1S6Q9UL45 172 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ATG2AQ2TAZ0 1938 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ANKRD12Q6UB98 2062 aa9.21□□□□□ -0.93
ATG4A-202ENST00000345734 KLHL2O95198 593 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 PRAMEF12O95522 483 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 CRTAMO95727 393 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 SLC12A2P55011 1212 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 AQP5P55064 265 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 ABCE1P61221 599 aaKnown RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 HYAL2Q12891 473 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 CSHL1Q14406 222 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 TAF1AQ15573 450 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 PLEKHG6Q3KR16 790 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 MPP7Q5T2T1 576 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF549Q6P9A3 640 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 GRASPQ7Z6J2 395 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 GALNT7Q86SF2 657 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 RBM23Q86U06 439 aaKnown RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 PIM3Q86V86 326 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM25Q86YD3 366 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 CAMK1DQ8IU85 385 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 PEX13Q92968 403 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 SKA1Q96BD8 255 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 LMLNQ96KR4 655 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 RPL10LQ96L21 214 aaKnown RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 TNKS2Q9H2K2 1166 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 LINC00597Q9H2U6 94 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 BPIFA1Q9NP55 256 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 POLR3BQ9NW08 1133 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 OXSMQ9NWU1 459 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 XPR1Q9UBH6 696 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-202ENST00000345734 RIMKLBQ9ULI2 386 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 VWA7Q9Y334 891 aa9.21□□□□□ -0.94
ATG4A-202ENST00000345734 A0A087X1B8 175 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TARM1B6A8C7 271 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 C5orf67F2Z3F1 127 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF821O75541 412 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PIGNO95427 931 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CBX6O95503 412 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CA3P07451 260 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 T-ENOLP0DO92 83 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 COL6A2P12110 1019 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CTPS1P17812 591 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PFKLP17858 780 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 GRK2P25098 689 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 HLA-FP30511 346 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CCR10P46092 362 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 STK19P49842 368 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CDKN1CP49918 316 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TIAL1Q01085 375 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 UBE3AQ05086 875 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 C9orf50Q5SZB4 431 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 FBXW10Q5XX13 1052 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 RETSATQ6NUM9 610 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM207Q6UWW9 146 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ZYG11AQ6WRX3 759 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 GPR150Q8NGU9 434 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 GABPB2Q8TAK5 448 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ANKRD49Q8WVL7 239 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ING5Q8WYH8 240 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 SGF29Q96ES7 293 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 EBF4Q9BQW3 602 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 GATA5Q9BWX5 397 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ADGRE3Q9BY15 652 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TLE6Q9H808 572 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ABCB8Q9NUT2 735 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 KCNK4Q9NYG8 393 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 RWDD3Q9Y3V2 267 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 SZT2Q5T011 3432 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 SPTBN5Q9NRC6 3674 aaKnown RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 XIRP2A4UGR9 3374 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 C2orf81A6NN90 581 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 NEDD8-MDP1E9PL57 170 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 DLX3O60479 287 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TRIM13O60858 407 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CYBBP04839 570 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 APOA4P06727 396 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ALPIP09923 528 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CCDC166P0CW27 439 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 LPOP22079 712 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 DDX6P26196 483 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms