RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PYCR3Q53H96 274 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 DARS2Q6PI48 645 aaKnown RBP15.95■□□□□ 0.14
ATG4B-201ENST00000344376 TRAM1L1Q8N609 369 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 IPMKQ8NFU5 416 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 GBA3Q9H227 469 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 POLR1BQ9H9Y6 1135 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 HACD3Q9P035 362 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 LRIT1Q9P2V4 623 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 TRIM10Q9UDY6 481 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 ZNHIT2Q9UHR6 403 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 RNF215Q9Y6U7 377 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 WDFY3Q8IZQ1 3526 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 RHPN2P1A8MT19 583 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 NTN3O00634 580 aaPredicted RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 ANXA9O76027 345 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 FTCDO95954 541 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 ATP1A1P05023 1023 aaKnown RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 MPOP05164 745 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 LSSP48449 732 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 GEMP55040 296 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 PRPSAP1Q14558 356 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 SIRPB2Q5JXA9 342 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 SLC25A41Q8N5S1 370 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 RNF10Q8N5U6 811 aaKnown RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 Q8N9G6 341 aaPredicted RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 TTC13Q8NBP0 860 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 CCDC112Q8NEF3 446 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 EID2BQ96D98 161 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 ATXN7L3BQ96GX2 97 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 OXNAD1Q96HP4 312 aaPredicted RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 MRGPRX2Q96LB1 330 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 PPP1R2P1Q96PQ5 205 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 HERPUD2Q9BSE4 406 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 LRRN3Q9H3W5 708 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 RABGEF1Q9UJ41 708 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 CNOT6Q9ULM6 557 aaKnown RBP15.94■□□□□ 0.14
ATG4B-201ENST00000344376 ENTPD2Q9Y5L3 495 aa15.94■□□□□ 0.14
ATG4B-201ENST00000344376 D6RAR5 112 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 KCNN4O15554 427 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 RRP8O43159 456 aaKnown RBP15.93■□□□□ 0.14
ATG4B-201ENST00000344376 KRT86O43790 486 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 SLC25A14O95258 325 aaPredicted RBP15.93■□□□□ 0.14
ATG4B-201ENST00000344376 FGF1P05230 155 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 CCL7P80098 99 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 SLC1A5Q15758 541 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 TBC1D25Q3MII6 688 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 C3orf38Q5JPI3 329 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 ZDHHC20Q5W0Z9 365 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 SPRED1Q7Z699 444 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 PHYKPLQ8IUZ5 450 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 GPR26Q8NDV2 337 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 FGF11Q92914 225 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 LRRC45Q96CN5 670 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 DCBLD2Q96PD2 775 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 PLEKHG4BQ96PX9 1271 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 STRADBQ9C0K7 418 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 CARD9Q9H257 536 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 SPO11Q9Y5K1 396 aa15.93■□□□□ 0.14
ATG4B-201ENST00000344376 OAS3Q9Y6K5 1087 aaKnown RBP15.93■□□□□ 0.14
ATG4B-201ENST00000344376 ANKRD11Q6UB99 2663 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 GPR89AB7ZAQ6 455 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ARHGAP6O43182 974 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ECEL1O95672 775 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 GPR89BP0CG08 455 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 BPIP17213 487 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 RBMS1P29558 406 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 HMGCLP35914 325 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 MAZP56270 477 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 AADACL2Q6P093 401 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 LRRC69Q6ZNQ3 347 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 GLT6D1Q7Z4J2 308 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 SFTPA2Q8IWL1 248 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ARL14Q8N4G2 192 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 WDR36Q8NI36 951 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 SNIP1Q8TAD8 396 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 BLOC1S5Q8TDH9 187 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 UBE2Q2Q8WVN8 375 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 GLYATL1Q969I3 302 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ZNF578Q96N58 590 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 TMEM74Q96NL1 305 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 FAM118BQ9BPY3 351 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 C10orf88Q9H8K7 445 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 SATB2Q9UPW6 733 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 AAR2Q9Y312 384 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 DMXL2Q8TDJ6 3036 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 CCDC187A0A096LP49 1063 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 A0A0U1RQJ8 604 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 GRID2O43424 1007 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 DNAJC6O75061 913 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 DXOO77932 396 aaKnown RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 INHBCP55103 352 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ANKRD20A2Q5SQ80 823 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ANKRD20A1Q5TYW2 823 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ANKRD20A3Q5VUR7 823 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 CHST15Q7LFX5 561 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 C17orf82Q86X59 251 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 SPATA13Q96N96 652 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 FICDQ9BVA6 458 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 OR2AG1Q9H205 316 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms