RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 DDX50Q9BQ39 737 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NR2E1Q9Y466 385 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GRID2O43424 1007 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SMAD6O43541 496 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 STAG3L3P0CL85 134 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NPTX1Q15818 432 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 XRRA1Q6P2D8 792 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SSX6Q7RTT6 188 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MTDHQ86UE4 582 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DYNLL2Q96FJ2 89 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ABCD2Q9UBJ2 740 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MAD2L2Q9UI95 211 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 EFNA1P20827 205 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LIMK1P53667 647 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RAB8AP61006 207 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM26Q6ZUK4 368 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLCO6A1Q86UG4 719 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLC22A9Q8IVM8 553 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RHOXF1Q8NHV9 184 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SMURF1Q9HCE7 757 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 XPNPEP3Q9NQH7 507 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LINC00862A6NCI5 91 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CCRL2O00421 344 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CDK2AP1O14519 115 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SPTLC1O15269 473 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 UGT2B17O75795 530 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PLK1P53350 603 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 UGT2B15P54855 530 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 HTRA4P83105 476 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TTC39BQ5VTQ0 682 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SHEQ5VZ18 495 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 UNC5BQ8IZJ1 945 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 C17orf62Q9BQA9 187 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DMRT2Q9Y5R5 561 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MAGI3Q5TCQ9 1506 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NRG3P56975 720 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MYL7Q01449 175 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 OGDHQ02218 1023 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PEX6Q13608 980 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PTPRNQ16849 979 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SPATA22Q8NHS9 363 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM41AQ96HV5 264 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 VPS25Q9BRG1 176 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SUPT6HQ7KZ85 1726 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SIGLEC16A6NMB1 481 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GZMAP12544 262 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DDOSTP39656 456 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GPR85P60893 370 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NFIXQ14938 502 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLFN13Q68D06 897 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ACBD4Q8NC06 268 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CDC26Q8NHZ8 85 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TEFMQ96QE5 360 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ANKRD60Q9BZ19 345 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DPP3Q9NY33 737 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SNTG2Q9NY99 539 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHGB1Q9Y5G3 927 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ALG1L2C9J202 215 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PLA2G6O60733 806 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ULK1O75385 1050 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CYP7B1O75881 506 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GABBR2O75899 941 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NR4A2P43354 598 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 IL31Q6EBC2 164 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF781Q8N8C0 355 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TRPM4Q8TD43 1214 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SAYSD1Q9NPB0 183 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NRBP2Q9NSY0 501 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TRPC4Q9UBN4 977 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FRMPD2Q68DX3 1309 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 WDR62O43379 1518 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 C20orf202A1L168 122 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GCP02774 474 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PROCP04070 461 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RPS19P39019 145 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ARL4AP40617 200 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MGAT5Q09328 741 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 BTBD16Q32M84 506 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LRIT3Q3SXY7 679 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM198BQ6UWH4 519 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PDZD9Q8IXQ8 264 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LGI2Q8N0V4 545 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 STPG2Q8N412 459 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RAB24Q969Q5 203 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 EIF2AK1Q9BQI3 630 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CST11Q9H112 138 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GPRC5DQ9NZD1 345 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PRKAG2Q9UGJ0 569 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ATP6AP2A0A1C7CYW4 349 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 OR2AT4A6NND4 320 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM220BPB1ANY3 271 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ATP6AP2O75787 350 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLC34A2O95436 690 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CD36P16671 472 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ORC1Q13415 861 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ACOX1Q15067 660 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 R3HCC1LQ7Z5L2 792 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 JAMLQ86YT9 394 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms