RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 IFNGP01579 166 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 C4BPAP04003 597 aaKnown RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 GIMD1P0DJR0 217 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 SNHG28P0DPA3 235 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 SLC20A2Q08357 652 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 BNIP2Q12982 314 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 MAPK11Q15759 364 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 ZIK1Q3SY52 487 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 RFTN2Q52LD8 501 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 KLHL17Q6TDP4 642 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 RP9Q8TA86 221 aaKnown RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 PWWP2AQ96N64 755 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 HNRNPABQ99729 332 aaKnown RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 ERGIC3Q9Y282 383 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 TLE2Q04725 743 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 MSANTD2Q6P1R3 559 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 KRT74Q7RTS7 529 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 IFNL1Q8IU54 200 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 UNC5BQ8IZJ1 945 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 EMID1Q96A84 441 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-202ENST00000342494 KCNS3Q9BQ31 491 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 TRMOQ9BU70 441 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 SH3GLB1Q9Y371 365 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 PCDHGC4Q9Y5F7 938 aa14.95□□□□□ -0.02
UBE3B-202ENST00000342494 IQCF5A8MTL0 148 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CCNCP24863 283 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CYP4F8P98187 520 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC44A4Q53GD3 710 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 RTL4Q6ZR62 310 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC26A9Q7LBE3 791 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 IRF2BP2Q7Z5L9 587 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 PROSER1Q86XN7 944 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 FAM129CQ86XR2 697 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 IKZF4Q9H2S9 585 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 PSMD13Q9UNM6 376 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 MRPS7Q9Y2R9 242 aaKnown RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 TRAF6Q9Y4K3 522 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 TRIM38O00635 465 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 STK16O75716 305 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC35G6P0C7Q6 338 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CHST15Q7LFX5 561 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 MTMR14Q8NCE2 650 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CLHC1Q8NHS4 586 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC22A17Q8WUG5 538 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CCDC177Q9NQR7 707 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 OSER1Q9NX31 292 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 RHBDL2Q9NX52 303 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 TRPS1Q9UHF7 1281 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SNPHO15079 494 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 BLKP51451 505 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 GALNT18Q6P9A2 607 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CUZD1Q86UP6 607 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 CIR1Q86X95 450 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC43A3Q8NBI5 491 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 DNASE1L2Q92874 299 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 ATG10Q9H0Y0 220 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 DPEP3Q9H4B8 488 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 MTRRQ9UBK8 725 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 DAPK2Q9UIK4 370 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SCAMP1O15126 338 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 GMFGO60234 142 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 TAC4Q86UU9 113 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 TSTD1Q8NFU3 115 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 SLC9A6Q92581 669 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 MYDGFQ969H8 173 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 GPR88Q9GZN0 384 aa14.94□□□□□ -0.02
UBE3B-202ENST00000342494 INSIG1O15503 277 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 CFIP05156 583 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 RAPSNQ13702 412 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 TIGD2Q4W5G0 525 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 RPL10LQ96L21 214 aaKnown RBP14.93□□□□□ -0.02
UBE3B-202ENST00000342494 CIDEBQ9UHD4 219 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 GNPDA1P46926 289 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 PTCD2Q8WV60 388 aaKnown RBP14.93□□□□□ -0.02
UBE3B-202ENST00000342494 KLHL32Q96NJ5 620 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 SLC9A7Q96T83 725 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 GPR21Q99679 349 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 RHOBTB2Q9BYZ6 727 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 CRISPLD1Q9H336 500 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 PACSIN3Q9UKS6 424 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 ALOX15BO15296 676 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 ACTR3P61158 418 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 DLG2Q15700 870 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 UBXN11Q5T124 520 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 FOXR2Q6PJQ5 311 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 FBXW8Q8N3Y1 598 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 XAGE5Q8WWM1 108 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 PCDHB18PQ96TA0 734 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 KLHL31Q9H511 634 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 MYBPHLA2RUH7 354 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 UGT2B17O75795 530 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 SYN1P17600 705 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 RPIAP49247 311 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 DGKEP52429 567 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 GBE1Q04446 702 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 SPIRE1Q08AE8 756 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 LAPTM5Q13571 262 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms