RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 NUDCD1Q96RS6 583 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 AGAP2Q99490 1192 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 HERPUD2Q9BSE4 406 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 VPS16Q9H269 839 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 GANQ9H2C0 597 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 STN1Q9H668 368 aaKnown RBP16.72■□□□□ 0.27
TRA2B-202ENST00000342294 NOD2Q9HC29 1040 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 CD84Q9UIB8 345 aa16.72■□□□□ 0.27
TRA2B-202ENST00000342294 CRYBG3Q68DQ2 2970 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 KIR2DS5A0A0G2JLQ3 304 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 A0A0G2JNG1 304 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 KIR2DS3K7RE56 304 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 DFFAO00273 331 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 EEF2KO00418 725 aaKnown RBP16.71■□□□□ 0.27
TRA2B-202ENST00000342294 TOX3O15405 576 aaPredicted RBP16.71■□□□□ 0.27
TRA2B-202ENST00000342294 LDLRP01130 860 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 CALB1P05937 261 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 FGF5P12034 268 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 F3P13726 295 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 ERCC2P18074 760 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 PGDP52209 483 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 OGDHQ02218 1023 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 KIR2DS5Q14953 304 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 PRR30Q53SZ7 412 aaPredicted RBP16.71■□□□□ 0.27
TRA2B-202ENST00000342294 MON1BQ7L1V2 547 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 CT55Q8WUE5 264 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 PIH1D2Q8WWB5 315 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 TCTN2Q96GX1 697 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 MCEEQ96PE7 176 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 OR6C1Q96RD1 312 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 VPS18Q9P253 973 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 CPNE7Q9UBL6 633 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.27
TRA2B-202ENST00000342294 ZNHIT2Q9UHR6 403 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 PADI1Q9ULC6 663 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 AP4E1Q9UPM8 1137 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 PRKAB1Q9Y478 270 aa16.71■□□□□ 0.27
TRA2B-202ENST00000342294 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 C21orf140B9A014 251 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 SPAG6O75602 509 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 PGLSO95336 258 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 PYGLP06737 847 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 HSPA9P38646 679 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 JAM2P57087 298 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 UBE2IP63279 158 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 PTSQ03393 145 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 RFX8Q6ZV50 586 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 USP45Q70EL2 814 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 CHST15Q7LFX5 561 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 RASGRP3Q8IV61 690 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 Q8NA96 180 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 EIF3CQ99613 913 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 MGME1Q9BQP7 344 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 SLC25A23Q9BV35 468 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 ACTL8Q9H568 366 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 ZNF768Q9H5H4 540 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 UCK1Q9HA47 277 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 ERRFI1Q9UJM3 462 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 CNOT6Q9ULM6 557 aaKnown RBP16.7■□□□□ 0.26
TRA2B-202ENST00000342294 KCNK6Q9Y257 313 aa16.7■□□□□ 0.26
TRA2B-202ENST00000342294 TNRC6AQ8NDV7 1962 aaKnown RBP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 OR5K4A6NMS3 321 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 CCNYL3P0C7X3 344 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 SLC2A4P14672 509 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 CTPS1P17812 591 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 CASP14P31944 242 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 SOX5P35711 763 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 SEPHS1P49903 392 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 LAMB3Q13751 1172 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 ZNF235Q14590 738 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 UGT8Q16880 541 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 C1QL3Q5VWW1 255 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 CPZQ66K79 652 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 LRRC66Q68CR7 880 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 DNAJC24Q6P3W2 148 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 EXD1Q8NHP7 514 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 PRR7Q8TB68 274 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 THAP4Q8WY91 577 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 SMIM14Q96QK8 99 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 DHX35Q9H5Z1 703 aaKnown RBP16.69■□□□□ 0.26
TRA2B-202ENST00000342294 LNPEPQ9UIQ6 1025 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 SRPK3Q9UPE1 567 aa16.69■□□□□ 0.26
TRA2B-202ENST00000342294 ANKRD62A6NC57 917 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 GADD45BO75293 160 aaPredicted RBP16.68■□□□□ 0.26
TRA2B-202ENST00000342294 ASMTLO95671 621 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 MT-ND3P03897 115 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
TRA2B-202ENST00000342294 ACP5P13686 325 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 ELAVL4P26378 380 aaKnown RBP16.68■□□□□ 0.26
TRA2B-202ENST00000342294 HSP90AA4PQ58FG1 418 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 RALGPS1Q5JS13 557 aa16.68■□□□□ 0.26
TRA2B-202ENST00000342294 ARMC12Q5T9G4 340 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms