RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SMIM35A0A1B0GVV1 85 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PAPSS1O43252 624 aaPredicted RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 RECQL4O94761 1208 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PTTG1O95997 202 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 RPL22P35268 128 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 HARS2P49590 506 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 ESCO2Q56NI9 601 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 BROXQ5VW32 411 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 USP51Q70EK9 711 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ARFGAP1Q8N6T3 406 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 TDRD5Q8NAT2 981 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 GTF2H4Q92759 462 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 MARC2Q969Z3 335 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PIWIL1Q96J94 861 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 NPAS2Q99743 824 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 GOLGA2P5Q9HBQ8 144 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ITM2CQ9NQX7 267 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 FAM49BQ9NUQ9 324 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 WARS2Q9UGM6 360 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 VWA7Q9Y334 891 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 SCN1AP35498 2009 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 LEUTXA8MZ59 168 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 TBX1O43435 398 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 MED7O43513 233 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 KRT1P04264 644 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 INHAP05111 366 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CCND3P30281 292 aaPredicted RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 ATICP31939 592 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CPT1AP50416 773 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 C5orf22Q49AR2 442 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 RAB6CQ53S08 254 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CYBRD1Q53TN4 286 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 FAXCQ5TGI0 409 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 ERAP2Q6P179 960 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 FBXO46Q6PJ61 603 aaPredicted RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 ACOT1Q86TX2 421 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 PIGZQ86VD9 579 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 XYLT1Q86Y38 959 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 C10orf107Q8IVU9 208 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 FAM71DQ8N9W8 422 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 FAM83FQ8NEG4 500 aaPredicted RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 SNAPC3Q92966 411 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 DACT3Q96B18 629 aaPredicted RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 C1orf74Q96LT6 269 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 DACH2Q96NX9 599 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 RAB6CQ9H0N0 254 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 AP5M1Q9H0R1 490 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 PLAC1Q9HBJ0 212 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 ADA2Q9NZK5 511 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 NUDT5Q9UKK9 219 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 MN1Q10571 1320 aaPredicted RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 HAS3O00219 553 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 PLK4O00444 970 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 GRAP2O75791 330 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CSH1P0DML2 217 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CSH2P0DML3 217 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 GFAPP14136 432 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 PSMA2P25787 234 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 UQCRC1P31930 480 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 EVI2BP34910 448 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CAPGP40121 348 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 RGS7P49802 495 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 SRP54P61011 504 aaKnown RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
RTN3-203ENST00000341307 ART3Q13508 389 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 DCAF4L1Q3SXM0 396 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 SH3PXD2AQ5TCZ1 1133 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 ZNF544Q6NX49 715 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 GDPD3Q7L5L3 318 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 SFRP1Q8N474 314 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 ZNF781Q8N8C0 355 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 CDKL2Q92772 493 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 APBA2Q99767 749 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 LHX5Q9H2C1 402 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 TCF7L2Q9NQB0 619 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 TSPAN16Q9UKR8 245 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
RTN3-203ENST00000341307 TYW5A2RUC4 315 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 FAM149AA5PLN7 773 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PDZK1P1A8MUH7 402 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 AP3D1O14617 1153 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 TNRC18O15417 2968 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 PGK1P00558 417 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PRKCGP05129 697 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 IL1R2P27930 398 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 DDOSTP39656 456 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms