RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MATN2O00339 956 aa10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 KPNA3O00505 521 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 CCNT2O60583 730 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 CLASP2O75122 1294 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 RHOP08100 348 aa10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 TAF1AQ15573 450 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 ISCA2Q86U28 154 aa10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 ZFRQ96KR1 1074 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 CFHR5Q9BXR6 569 aa10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 EML4Q9HC35 981 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-202ENST00000340209 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 A0A1B0GTL3 188 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ECI2O75521 394 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CAPN15O75808 1086 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 HLA-FP30511 346 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 HNF1BP35680 557 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 WASP42768 502 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 FPGSQ05932 587 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SLC5A9Q2M3M2 681 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SLC44A4Q53GD3 710 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 DGKKQ5KSL6 1271 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PAOXQ6QHF9 649 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PPFIBP2Q8ND30 876 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 AARSD1Q9BTE6 412 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ARNT2Q9HBZ2 717 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 DNAJC28Q9NX36 388 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PABPN1LA6NDY0 278 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PLK4O00444 970 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 GRM6O15303 877 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 INPP4BO15327 924 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 BAIAP3O94812 1187 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PARNO95453 639 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PSMG1O95456 288 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 S100BP04271 92 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CTSAP10619 480 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 HLA-EP13747 358 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 DNAJB1P25685 340 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SERPINA4P29622 427 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 MAGEA12P43365 314 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ARHGEF7Q14155 803 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CHRNA6Q15825 494 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 FUT11Q495W5 492 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 DPY19L3Q6ZPD9 716 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CNTN4Q8IWV2 1026 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SCAMP4Q969E2 229 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 KLHL32Q96NJ5 620 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PANX3Q96QZ0 392 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ATP13A3Q9H7F0 1226 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 COPG1Q9Y678 874 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CHD9Q3L8U1 2897 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 A0A1W2PQ67 120 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 F8W8V4 182 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 PIP5K1BO14986 540 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 TPST1O60507 370 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SLC25A14O95258 325 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CD160O95971 181 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 TYRP14679 529 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CD1DP15813 335 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ITGALP20701 1170 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 CCNHP51946 323 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ZNF140P52738 457 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 IL2P60568 153 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 MRPS22P82650 360 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 TUBB3Q13509 450 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 FASTKQ14296 549 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 GPSM1Q86YR5 675 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ZSWIM3Q96MP5 696 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 HGH1Q9BTY7 390 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 WRAP53Q9BUR4 548 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SPATA16Q9BXB7 569 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 ZNHIT2Q9UHR6 403 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 SLC25A13Q9UJS0 675 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 INSL6Q9Y581 213 aa10.11□□□□□ -0.79
RBFOX1-202ENST00000340209 OR2AG2A6NM03 316 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 CAPN14A8MX76 684 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 CA5AP35218 305 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 GJA8P48165 433 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 KRT72Q14CN4 511 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 ACAP2Q15057 778 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 TCEAL5Q5H9L2 206 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 CMTR2Q8IYT2 770 aaKnown RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 ZNF599Q96NL3 588 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 ZBP1Q9H171 429 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 MRM3Q9HC36 420 aaKnown RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 NLE1Q9NVX2 485 aaPredicted RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 SAGE1Q9NXZ1 904 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 KIAA1522Q9P206 1035 aaPredicted RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 INTS6Q9UL03 887 aaKnown RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 EME2A4GXA9 379 aaPredicted RBP10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 TBX10O75333 385 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 ITGAXP20702 1163 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 GGT5P36269 586 aa10.1□□□□□ -0.79
RBFOX1-202ENST00000340209 PPARGP37231 505 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms