RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 GALNT7Q86SF2 657 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 SCUBE1Q8IWY4 988 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 DEFB107AQ8IZN7 70 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 RNF148Q8N7C7 305 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 FIBINQ8TAL6 211 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 GRIN3AQ8TCU5 1115 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 TRPC4APQ8TEL6 797 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 CYB5D2Q8WUJ1 264 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 PANX3Q96QZ0 392 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 ATOH8Q96SQ7 321 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 RAD9AQ99638 391 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 SEMA4BQ9NPR2 832 aaPredicted RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 KIAA1522Q9P206 1035 aaPredicted RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 LINC01553A4QN01 128 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 C9JVG2 144 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 PRAMEF1O95521 474 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 PKMP14618 531 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 PIK3R1P27986 724 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 NME5P56597 212 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 MESP2Q0VG99 397 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 ASPHQ12797 758 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 LY6G5CQ5SRR4 150 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 TMEM215Q68D42 235 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 LCA5Q86VQ0 697 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 PEX13Q92968 403 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 EMILIN2Q9BXX0 1053 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 STN1Q9H668 368 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 ZDHHC6Q9H6R6 413 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 RNPEPL1Q9HAU8 725 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 ZFYVE1Q9HBF4 777 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 PKP3Q9Y446 797 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 WASF2Q9Y6W5 498 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 NPHS1O60500 1241 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 HNRNPCL1O60812 293 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 ECI2O75521 394 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 LATS1O95835 1130 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 TPBGLP0DKB5 382 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 ITGAXP20702 1163 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 IMPDH1P20839 514 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 CCND1P24385 295 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 KPNA2P52292 529 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 ATXN3P54252 364 aaPredicted RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 DNAJB13P59910 316 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 RCN1Q15293 331 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 GEN1Q17RS7 908 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 TCHHL1Q5QJ38 904 aaPredicted RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 ZNF783Q6ZMS7 281 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 DPY19L3Q6ZPD9 716 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 FAM43BQ6ZT52 329 aaPredicted RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 RETREG1Q9H6L5 497 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 IL26Q9NPH9 171 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 CD84Q9UIB8 345 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 RNF112Q9ULX5 631 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 COPG1Q9Y678 874 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 A0A0J9YYE9 177 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 ANTXRLA6NF34 631 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 EIF4E1BA6NMX2 242 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 TSPAN12O95859 305 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 TRBC1P01850 177 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 UGT2B4P06133 528 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 UGT3A1Q6NUS8 523 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 SCIMPQ6UWF3 145 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 HPS6Q86YV9 775 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 OR9I1Q8NGQ6 314 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 CNDP1Q96KN2 507 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 APOL5Q9BWW9 433 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 ASB8Q9H765 288 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 TDP1Q9NUW8 608 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 INTS10Q9NVR2 710 aaKnown RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 MBD1Q9UIS9 605 aaPredicted RBP15.36■□□□□ 0.05
MBD1-203ENST00000339998 SLC30A1Q9Y6M5 507 aa15.36■□□□□ 0.05
MBD1-203ENST00000339998 STX16-NPEPL1H3BU86 382 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 HMGCLP35914 325 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 SUOXP51687 545 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 HK3P52790 923 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 LAMB3Q13751 1172 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 RIPOR1Q6ZS17 1223 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 ACAD11Q709F0 780 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 SERPINA9Q86WD7 417 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 CD200R1Q8TD46 325 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 ACDQ96AP0 544 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 LINGO1Q96FE5 620 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 MID1IP1Q9NPA3 183 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 BTRCQ9Y297 605 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 TRAF6Q9Y4K3 522 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 TIMM22Q9Y584 194 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 E5RI56 91 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 TM7SF2O76062 418 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 CDK14O94921 469 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 TYRP14679 529 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 BPIP17213 487 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 EEF1DP29692 281 aaKnown RBP15.35■□□□□ 0.05
MBD1-203ENST00000339998 SLC20A2Q08357 652 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.057e-7■■■□□ 17.1
MBD1-203ENST00000339998 GK5Q6ZS86 529 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 OR2AP1Q8NGE2 309 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 ITFG1Q8TB96 612 aa15.35■□□□□ 0.05
MBD1-203ENST00000339998 FUBP1Q96AE4 644 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms