RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 ARMC5Q96C12 935 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 CERS4Q9HA82 394 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 MEN1O00255 615 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 IGSF6O95976 241 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
USP47-202ENST00000339865 WSCD2Q2TBF2 565 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 CRTC2Q53ET0 693 aaPredicted RBP12.79□□□□□ -0.36
USP47-202ENST00000339865 ADNP2Q6IQ32 1131 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 SPATA6LQ8N4H0 392 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 ZNF570Q96NI8 536 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 NODALQ96S42 347 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 TRIM36Q9NQ86 728 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 FADS2P1A8MWK0 482 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 MT-ND1P03886 318 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 HNRNPLP14866 589 aaKnown RBP eCLIP12.79□□□□□ -0.364e-6■□□□□ 11
USP47-202ENST00000339865 UBAP2Q5T6F2 1119 aaKnown RBP12.79□□□□□ -0.36
USP47-202ENST00000339865 ASB18Q6ZVZ8 466 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 C16orf59Q7L2K0 433 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 BEND5Q7L4P6 421 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 FAM124AQ86V42 546 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 RNF208Q9H0X6 261 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 ZDHHC6Q9H6R6 413 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 TRHDEQ9UKU6 1024 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 GPSM3Q9Y4H4 160 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 MATN4O95460 622 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 CATP04040 527 aaKnown RBP12.79□□□□□ -0.36
USP47-202ENST00000339865 GZMAP12544 262 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 SUN3Q8TAQ9 357 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 RGCCQ9H4X1 137 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 ATP13A1Q9HD20 1204 aa12.79□□□□□ -0.36
USP47-202ENST00000339865 KAT7O95251 611 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 AXLP30530 894 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 HSD17B2P37059 387 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 MMP13P45452 471 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 CBLBQ13191 982 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 KCTD8Q6ZWB6 473 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZNF571Q7Z3V5 609 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 PPM1MQ96MI6 270 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZNF518BQ9C0D4 1074 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 GSKIPQ9P0R6 139 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 GULP1Q9UBP9 304 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ASTN2O75129 1339 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 MICAL2O94851 1124 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 IFNA2P01563 188 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 SEMA5AQ13591 1074 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ALG10BQ5I7T1 473 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 STXBP5Q5T5C0 1151 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZCCHC9Q8N567 271 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 PRPF19Q9UMS4 504 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 ACVR2BQ13705 512 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 TREML1Q86YW5 311 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 HIST1H2AAQ96QV6 131 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 SLC22A3O75751 556 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 TFEBP19484 476 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 LUMP51884 338 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 TLE2Q04725 743 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 PABPC1LQ4VXU2 614 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 GTPBP3Q969Y2 492 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 WDR37Q9Y2I8 494 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 GPR89AB7ZAQ6 455 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 M0R129 80 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 PAPSS2O95340 614 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 GPR89BP0CG08 455 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 SLC2A2P11168 524 aaPredicted RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 PSMB4P28070 264 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 EGFL6Q8IUX8 553 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZNF709Q8N972 641 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ZSCAN1Q8NBB4 408 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 PDPRQ8NCN5 879 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 MXRA8Q9BRK3 442 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 TUT1Q9H6E5 874 aaKnown RBP12.78□□□□□ -0.36
USP47-202ENST00000339865 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 PLEKHA6Q9Y2H5 1048 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 A8MUI8 341 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 SLC16A8O95907 504 aa12.78□□□□□ -0.36
USP47-202ENST00000339865 IFNA21P01568 189 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms