RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 EI24O14681 340 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CST8O60676 142 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MAFO75444 373 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PTTG1O95997 202 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LTFP02788 710 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 HDCP19113 662 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 IMPDH1P20839 514 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 DDOSTP39656 456 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ACOT2P49753 483 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LIG4P49917 911 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MFSD10Q14728 455 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 STXBP2Q15833 593 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ODR4Q5SWX8 454 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PXDC1Q5TGL8 231 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM236Q5W0B7 351 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CYP2R1Q6VVX0 501 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 STRADAQ7RTN6 431 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PRSS48Q7RTY5 328 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF438Q7Z4V0 828 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 HID1Q8IV36 788 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 FAM178BQ8IXR5 827 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PCDH20Q8N6Y1 951 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PAPD5Q8NDF8 572 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PSD4Q8NDX1 1056 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 OR5H6Q8NGV6 325 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SLC39A13Q96H72 371 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LRCH3Q96II8 777 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 METTL2AQ96IZ6 378 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CEP170P1Q96L14 293 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MFSD14AQ96MC6 490 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CASD1Q96PB1 797 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 S1PR5Q9H228 398 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MINDY3Q9H8M7 445 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 EFCAB1Q9HAE3 211 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM8AQ9HCN3 771 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 C20orf96Q9NUD7 363 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ABCD2Q9UBJ2 740 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZC3H7BQ9UGR2 993 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZDHHC2Q9UIJ5 367 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NBPF19A0A087WUL8 3843 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LEUTXA8MZ59 168 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 AP3B1O00203 1094 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 BET1O15155 118 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 HDAC3O15379 428 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PHGDHO43175 533 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NDUFS2O75306 463 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 INMTO95050 263 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SUPT20HL2P0C7V6 817 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CBLP22681 906 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CFL1P23528 166 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 KDELR1P24390 212 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MPSTP25325 297 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TGFBR1P36897 503 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SLC26A3P40879 764 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 BASP1P80723 227 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GTF2BQ00403 316 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GBE1Q04446 702 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 FOXD4Q12950 439 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NAB1Q13506 487 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GALNT3Q14435 633 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CTU2Q2VPK5 515 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PAGE2BQ5JRK9 111 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 VARS2Q5ST30 1063 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SHEQ5VZ18 495 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 KRT39Q6A163 491 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 UTS2BQ765I0 119 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TDRD5Q8NAT2 981 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SMG8Q8ND04 991 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 OR13J1Q8NGT2 312 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 FBLIM1Q8WUP2 373 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 FAR1Q8WVX9 515 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MYRFLQ96LU7 910 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF717Q9BY31 904 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NXF2Q9GZY0 626 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 DSN1Q9H410 356 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PLEKHA5Q9HAU0 1116 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NTN4Q9HB63 628 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TUFT1Q9NNX1 390 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LTB4R2Q9NPC1 389 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CHST12Q9NRB3 414 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 RGS18Q9NS28 235 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 USP22Q9UPT9 525 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CDY2AQ9Y6F7 541 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CDY1Q9Y6F8 540 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SMIM35A0A1B0GVV1 85 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 H0YAE9 185 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 APOC4-APOC2K7ER74 178 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 LRCH4O75427 683 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CABYRO75952 493 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 DDHD2O94830 711 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CDK14O94921 469 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PGK1P00558 417 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 APOC2P02655 101 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 POU2F2P09086 479 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SMIM10L2AP0DMW4 78 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SMIM10L2BP0DMW5 78 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 KRT3P12035 628 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms