RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ARSAP15289 507 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 NRG1Q02297 640 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 SLC12A1Q13621 1099 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 ATP1A4Q13733 1029 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 RAP1GAP2Q684P5 730 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 IGSF8Q969P0 613 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 ZYG11BQ9C0D3 744 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 RHOJQ9H4E5 214 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 CROTQ9UKG9 612 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 FAM92AA1XBS5 289 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 J3KR12 359 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 MRASO14807 208 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 SEC24DO94855 1032 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 HAPLN1P10915 354 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 CDH3P22223 829 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 AVPR1AP37288 418 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 PCSK7Q16549 785 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 DENND5AQ6IQ26 1287 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 FBXL22Q6P050 247 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 ZNF683Q8IZ20 524 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 HMCESQ96FZ2 354 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 GPR78Q96P69 363 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 TTPALQ9BTX7 342 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 KIFC1Q9BW19 673 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 FSD1LQ9BXM9 530 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 CCSER2Q9H7U1 834 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 GMPR2Q9P2T1 348 aaKnown RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 AP3B1O00203 1094 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 TBC1D4O60343 1298 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 SNAP91O60641 907 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 SNRPB2P08579 225 aaKnown RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 HSPA8P11142 646 aaKnown RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 SLC7A2P52569 658 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 CNSTQ6PJW8 725 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 HACD2Q6Y1H2 254 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 ATP6V0D2Q8N8Y2 350 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 ACDQ96AP0 544 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 KLHL5Q96PQ7 755 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 TMEM175Q9BSA9 504 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 PRDM5Q9NQX1 630 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 AGPAT4Q9NRZ5 378 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 TRNAU1APQ9NX07 287 aaKnown RBP18.71■□□□□ 0.59
PSPC1-201ENST00000338910 NCKIPSDQ9NZQ3 722 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 TMEM9Q9P0T7 183 aa18.71■□□□□ 0.59
PSPC1-201ENST00000338910 WASH4PA8MWX3 477 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 J3QRK9 145 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 SRP72O76094 671 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 RHOQP17081 205 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 RPL17P18621 184 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 DNAJB1P25685 340 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 CHRNA4P43681 627 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ALDH7A1P49419 539 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 GEMP55040 296 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 MAXP61244 160 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ITKQ08881 620 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ELAVL2Q12926 359 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 PCID2Q5JVF3 399 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 FAM117BQ6P1L5 589 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 PKN3Q6P5Z2 889 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 LAYNQ6UX15 382 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 PIWIL4Q7Z3Z4 852 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 CIR1Q86X95 450 aaPredicted RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 KLHDC8BQ8IXV7 354 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 UMODL1-AS1Q8N2C9 162 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 FBXL8Q96CD0 374 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 PABPC5Q96DU9 382 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 BTN2A3PQ96KV6 586 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 PCDH10Q9P2E7 1040 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 CORINQ9Y5Q5 1042 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 UBDO15205 165 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ADAM12O43184 909 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 NRP2O60462 931 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 E2F6O75461 281 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 ETFBP38117 255 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 GRSF1Q12849 480 aaKnown RBP eCLIP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 NFATC3Q12968 1075 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 TRIP4Q15650 581 aaPredicted RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 TXNDC5Q8NBS9 432 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 TRUB1Q8WWH5 349 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 OMDQ99983 421 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 SLC39A3Q9BRY0 314 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 TDRD1Q9BXT4 1180 aaKnown RBP18.7■□□□□ 0.58
PSPC1-201ENST00000338910 MEAF6Q9HAF1 191 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 NT5MQ9NPB1 228 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 GTSE1Q9NYZ3 720 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 SLC30A1Q9Y6M5 507 aa18.7■□□□□ 0.58
PSPC1-201ENST00000338910 NYNRINQ9P2P1 1898 aaKnown RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TTC24A2A3L6 582 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ESRRBO95718 433 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 CLIC3O95833 236 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ADRA1AP35348 466 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TNK2Q07912 1038 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 SLC10A7Q0GE19 358 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 PPP1R3AQ16821 1122 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 CCDC92Q53HC0 331 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 PITRM1Q5JRX3 1037 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TBCELQ5QJ74 424 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms