RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TPM3P06753 285 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF30P17039 623 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 ARSDP51689 593 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 IFI35P80217 286 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 C19orf57Q0VDD7 668 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 TBX2Q13207 712 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 NOMO1Q15155 1222 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 MAP9Q49MG5 647 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 KAZNQ674X7 775 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 INO80CQ6PI98 192 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF438Q7Z4V0 828 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 VASH2Q86V25 355 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 RNF31Q96EP0 1072 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 TRIB3Q96RU7 358 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 C10orf88Q9H8K7 445 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 TBC1D29Q9UFV1 150 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 PCDHGA7Q9Y5G6 932 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 SPO11Q9Y5K1 396 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 A8MU76 341 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SNX2O60749 519 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 MTA2O94776 668 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC4A1P02730 911 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 FGF3P11487 239 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 PECAM1P16284 738 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 CSF2RBP32927 897 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 MAGEA1P43355 309 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 BIRC2Q13490 618 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 TRIM14Q14142 442 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SNAP47Q5SQN1 464 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 HENMT1Q5T8I9 393 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 NT5DC3Q86UY8 548 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 GALNT13Q8IUC8 556 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC37A2Q8TED4 501 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 CCDC97Q96F63 343 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 IMP4Q96G21 291 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 LYSMD1Q96S90 227 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 BPIFA1Q9NP55 256 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 OCIAD1Q9NX40 245 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC23A2Q9UGH3 650 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 ALG6Q9Y672 507 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 KALRNO60229 2985 aa13.25□□□□□ -0.29
NUDCD3-201ENST00000338427 AHCTF1Q8WYP5 2266 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 PYCARD-AS1I3L0S3 204 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 TK2O00142 265 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 MTX2O75431 263 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 PMPCBO75439 489 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 ACP5P13686 325 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 CA5AP35218 305 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 PPM1FP49593 454 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 LIMK2P53671 638 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 UCNP55089 124 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 RPL26P61254 145 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 CYP4F2P78329 520 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 EIF3IQ13347 325 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 NFATC2Q13469 925 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 NR1D2Q14995 579 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 PDK1Q15118 436 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 TMC3Q7Z5M5 1100 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 EXD3Q8N9H8 876 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 TADA1Q96BN2 335 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 CMKLR1Q99788 373 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC25A51Q9H1U9 297 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 OR2AG1Q9H205 316 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 ZFYVE1Q9HBF4 777 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 PRDM8Q9NQV8 689 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 KCNK4Q9NYG8 393 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 TMPRSS11EQ9UL52 423 aa13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 RPL26L1Q9UNX3 145 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-201ENST00000338427 ERVH48-1M5A8F1 160 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 GRID2O43424 1007 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 CST8O60676 142 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 BPIP17213 487 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 PTPN3P26045 913 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 MLLT3P42568 568 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 CDKN2BP42772 138 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 GPR3P46089 330 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 RHDQ02161 417 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 CDK18Q07002 472 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms