RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 SOX13Q9UN79 622 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 EML5Q05BV3 1969 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM237BA0A1B0GVD1 139 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 CCDC78A2IDD5 438 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 FADS2P1A8MWK0 482 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 H3BM21 787 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 YKT6O15498 198 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 RASGRP1O95267 797 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PRAMEF1O95521 474 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PAMP19021 973 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 TGM1P22735 817 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 MC4RP32245 332 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PPARGP37231 505 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 RXRGP48443 463 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PLTPP55058 493 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PRAMEP78395 509 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 CRADDP78560 199 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 XIAPP98170 497 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 CACNG1Q06432 222 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 FZD2Q14332 565 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 SUZ12Q15022 739 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 HIF1AQ16665 826 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF423Q2M1K9 1284 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 BBS9Q3SYG4 887 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 ATP13A5Q4VNC0 1218 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 ZRANB3Q5FWF4 1079 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PRAMEF14Q5SWL7 426 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 KDM7AQ6ZMT4 941 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 TAS2R42Q7RTR8 314 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 SNX20Q7Z614 316 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 PARGQ86W56 976 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 ART4Q93070 314 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.82□□□□□ -0.522e-6■■■■■ 47.9
SPTLC1-202ENST00000337841 LRRC39Q96DD0 335 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 STAMBPL1Q96FJ0 436 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 COX14Q96I36 57 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 SIGLEC10Q96LC7 697 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 VPS35Q96QK1 796 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 LGR4Q9BXB1 951 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 FOXP3Q9BZS1 431 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 EPB41L5Q9HCM4 733 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 FSCN3Q9NQT6 498 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 GPR27Q9NS67 375 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 DNAJC28Q9NX36 388 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 KLQ9UEF7 1012 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 CRLS1Q9UJA2 301 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 GON4LQ3T8J9 2241 aa11.82□□□□□ -0.52
SPTLC1-202ENST00000337841 FANCMQ8IYD8 2048 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 TRPM6Q9BX84 2022 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 LNP1A1A4G5 178 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 CCDC162PA2VCL2 907 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 TMEM202A6NGA9 273 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 CCL22O00626 93 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 VEGFDO43915 354 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 TTC4O95801 387 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 SOD1P00441 154 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 CSF2P04141 144 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 POLBP06746 335 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 CTSEP14091 401 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 JUNDP17535 347 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 NMBRP28336 390 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 MAGEA3P43357 314 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 HNRNPKP61978 463 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 ACVR1Q04771 509 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 EIF2B5Q13144 721 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 NFATC2Q13469 925 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 PEX6Q13608 980 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 ANKRD20A4Q4UJ75 823 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 FASTKD1Q53R41 847 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 FNBP1LQ5T0N5 605 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 LYPLAL1Q5VWZ2 237 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 AFTPHQ6ULP2 937 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 CENPUQ71F23 418 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 RD3Q7Z3Z2 195 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 PHYKPLQ8IUZ5 450 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 HID1Q8IV36 788 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 IFT20Q8IY31 132 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 SLC22A18ASQ8N1D0 253 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 OR4L1Q8NH43 312 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 TSACCQ96A04 125 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 DCUN1D1Q96GG9 259 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF778Q96MU6 729 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 EBNA1BP2Q99848 306 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 EDEM2Q9BV94 578 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 ZCCHC2Q9C0B9 1178 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 SUDS3Q9H7L9 328 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 RMI1Q9H9A7 625 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 GRHL1Q9NZI5 618 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 SLC2A6Q9UGQ3 507 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms