RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 STK16O75716 305 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 CFHP08603 1231 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 IL12AP29459 219 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 GPR1P46091 355 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 HNRNPDQ14103 355 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 IKBKEQ14164 716 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 DPYSL2Q16555 572 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 REP15Q6BDI9 236 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 DENND5AQ6IQ26 1287 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 R3HCC1LQ7Z5L2 792 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 IRGQQ8WZA9 623 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 FBXL18Q96ME1 805 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 IPPKQ9H8X2 491 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 CXorf21Q9HAI6 301 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 TRAV19A0A0A6YYK7 116 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ACADMP11310 421 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 DAOAP59103 153 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 TAC4Q86UU9 113 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 GLIS1Q8NBF1 620 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 FAIM2Q9BWQ8 316 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 SLC9A8Q9Y2E8 581 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ELOVL7A1L3X0 281 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 NR2F6P10588 404 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 HTR7P34969 479 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 SLC26A3P40879 764 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 GRIA1P42261 906 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ANXA8L1Q5VT79 327 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 RAET1GQ6H3X3 334 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 BHLHB9Q6PI77 547 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 CERS6Q6ZMG9 384 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ZFP28Q8NHY6 868 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 MUC13Q9H3R2 512 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 GMIPQ9P107 970 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 YJEFN3A6XGL0 299 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ERAL1O75616 437 aaKnown RBP13.69□□□□□ -0.22
RTN4-202ENST00000337526 C1RP00736 705 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 THRBP10828 461 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 CXCR3P49682 368 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 DCAKDQ8WVC6 231 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 ERLEC1Q96DZ1 483 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 WDR12Q9GZL7 423 aaKnown RBP13.69□□□□□ -0.22
RTN4-202ENST00000337526 RAB23Q9ULC3 237 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 SNX10Q9Y5X0 201 aa13.69□□□□□ -0.22
RTN4-202ENST00000337526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 CHRNGP07510 517 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 CLCNKBP51801 687 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ATG14Q6ZNE5 492 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 GALNT5Q7Z7M9 940 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SLC38A2Q96QD8 506 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 A0A088AWK7 358 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 MSCO60682 206 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SERPINB7O75635 380 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 FYNP06241 537 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ZNF10P21506 573 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 CPTPQ5TA50 214 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 UTS2BQ765I0 119 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 IZUMO1Q8IYV9 350 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 CLEC4CQ8WTT0 213 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SLITRK2Q9H156 845 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 RRAGCQ9HB90 399 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 PLK2Q9NYY3 685 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ZNF214Q9UL59 606 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 FZD10Q9ULW2 581 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 NPHS1O60500 1241 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 WARSP23381 471 aaKnown RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 PBX3P40426 434 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 CTSKP43235 329 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 UGT2B15P54855 530 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ROPN1LQ96C74 230 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 RBM4BQ9BQ04 359 aaKnown RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 RBM4Q9BWF3 364 aaKnown RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 FAM53CQ9NYF3 392 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SLC9A3R1O14745 358 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 HAT1O14929 419 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 SERPINA1P01009 418 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 AMHP03971 560 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 ITPKAP23677 461 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 NUP62P37198 522 aaPredicted RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 INHBEP58166 350 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms