RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PDK4Q16654 411 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 AMZ2Q86W34 360 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 VN1R2Q8NFZ6 395 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 PPP3R2Q96LZ3 170 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 CD84Q9UIB8 345 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 AP3M1Q9Y2T2 418 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 PCSK2P16519 638 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 LRRC74AQ0VAA2 488 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 KLF1Q13351 362 aaPredicted RBP9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 USP39Q53GS9 565 aaKnown RBP9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 XKR6Q5GH73 641 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 ZNF852Q6ZMS4 543 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 TMEM109Q9BVC6 243 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 CRISPLD2Q9H0B8 497 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 ADAM7Q9H2U9 754 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 ZNF576Q9H609 170 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 ATAD3AQ9NVI7 634 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 NUDT4Q9NZJ9 180 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 XPR1Q9UBH6 696 aa9.27□□□□□ -0.93
FNDC3B-201ENST00000336824 PTPN5P54829 565 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 DMTNQ08495 405 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 FASTKD3Q14CZ7 662 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 HTR3DQ70Z44 454 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TAF8Q7Z7C8 310 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 C17orf64Q86WR6 236 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 CPXM2Q8N436 756 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TTLL2Q9BWV7 592 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 SEMA4BQ9NPR2 832 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 KLQ9UEF7 1012 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 ENTPD4Q9Y227 616 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 SCN10AQ9Y5Y9 1956 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 ULK1O75385 1050 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PGLSO95336 258 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 DRD1P21728 446 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PPP2R1BP30154 601 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 ZBTB17Q13105 803 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RTN4RL1Q86UN2 441 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RAB11FIP5Q9BXF6 653 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RAD21L1Q9H4I0 556 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PADI4Q9UM07 663 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 GSAPA4D1B5 854 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 ISM1B1AKI9 464 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 E9PBE3 544 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 F8W810 466 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 NR5A2O00482 541 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 KLHL41O60662 606 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RASSF9O75901 435 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 MYBL2P10244 700 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 EEF1DP29692 281 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 HSD17B2P37059 387 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 MPP1Q00013 466 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 FRG1Q14331 258 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 IGSF8Q969P0 613 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 SORCS3Q9UPU3 1222 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RAP2CQ9Y3L5 183 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TRIM43BA6NCK2 446 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TFE3P19532 575 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 CYP51A1Q16850 503 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 IRAK1BP1Q5VVH5 260 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TRIM43Q96BQ3 446 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 GPR21Q99679 349 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 CCT7Q99832 543 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 NDEL1Q9GZM8 345 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PLLPQ9Y342 182 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 WDR81Q562E7 1941 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 OXTRP30559 389 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 ALDH9A1P49189 494 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PKDCCQ504Y2 493 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TMEM220Q6QAJ8 160 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 FAIM2Q9BWQ8 316 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 SH3BP4Q9P0V3 963 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TTC3P53804 2025 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 KAT7O95251 611 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 IFNA14P01570 189 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 HGFP14210 728 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 CDH2P19022 906 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 PNLIPRP1P54315 467 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RPS21P63220 83 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 CDC16Q13042 620 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 AGKQ53H12 422 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 TRIM68Q6AZZ1 485 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 KLF16Q9BXK1 252 aaPredicted RBP9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 LGALS13Q9UHV8 139 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 AURKCQ9UQB9 309 aa9.26□□□□□ -0.93
FNDC3B-201ENST00000336824 RNF103-CHMP3A0A140T963 221 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CCDC162PA2VCL2 907 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SEC24AO95486 1093 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 KRT20P35900 424 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FSTL4Q6MZW2 842 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 IQCKQ8N0W5 287 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 AIF1LQ9BQI0 150 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 IL1RL2Q9HB29 575 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SSU72Q9NP77 194 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CCDC154A6NI56 674 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms