RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CALML6Q8TD86 181 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 CCDC77Q9BR77 488 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 SPATA16Q9BXB7 569 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 CTNNAL1Q9UBT7 734 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 LRRC72A6NJI9 287 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 K7ESM1 405 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 ITGALP20701 1170 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 OGNP20774 298 aaKnown RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 OXTRP30559 389 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 MAT2AP31153 395 aaKnown RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 DPTQ07507 201 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 MRNIPQ6NTE8 343 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 PACS1Q6VY07 963 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 SLC26A11Q86WA9 606 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 TRIM69Q86WT6 500 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 LMNTD2Q8IXW0 634 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 MAML2Q8IZL2 1156 aaPredicted RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 TRAM1L1Q8N609 369 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 DTWD2Q8NBA8 298 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 CCDC97Q96F63 343 aaPredicted RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 SLC17A9Q9BYT1 436 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 C6orf106Q9H6K1 298 aaPredicted RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 SLC24A2Q9UI40 661 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 SMIM23A6NLE4 172 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 AXIN1O15169 862 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 S1PR4O95977 384 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 PAK4O96013 591 aaPredicted RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 HOXA6P31267 233 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 ABCG1P45844 678 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 WSCD2Q2TBF2 565 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 CEP85LQ5SZL2 805 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 STRA8Q7Z7C7 330 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 CPNE1Q99829 537 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 ZSCAN5AQ9BUG6 496 aa21.37■■□□□ 1.01
TPM1-204ENST00000334895 FBXO6Q9NRD1 293 aaPredicted RBP21.37■■□□□ 1.01
TPM1-204ENST00000334895 RASGRF2O14827 1237 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 RAD51BO15315 384 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 AHSGP02765 367 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 IVLP07476 585 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 MSH2P43246 934 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 LEPRP48357 1165 aaKnown RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 DBN1Q16643 649 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 GPR33Q49SQ1 333 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 ADGRD1Q6QNK2 874 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 KIAA0408Q6ZU52 694 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 NLRP8Q86W28 1048 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 SERPINA9Q86WD7 417 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 TDRPQ86YL5 185 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 TP53I13Q8NBR0 393 aaPredicted RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 PLA2G15Q8NCC3 412 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 KLF6Q99612 283 aaPredicted RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 GPR174Q9BXC1 333 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 ROPN1BQ9BZX4 212 aaPredicted RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 ROPN1Q9HAT0 212 aaPredicted RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 MBNL1Q9NR56 388 aaKnown RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 MBD1Q9UIS9 605 aaPredicted RBP21.36■■□□□ 1.01
TPM1-204ENST00000334895 INVSQ9Y283 1065 aa21.36■■□□□ 1.01
TPM1-204ENST00000334895 LATO43561 262 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 HAUS5O94927 633 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 IGHV4-34P06331 123 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 GP5P40197 560 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 ITGA9Q13797 1035 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 KDM7AQ6ZMT4 941 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 TAS2R42Q7RTR8 314 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 GALNT7Q86SF2 657 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 NXPE1Q8N323 547 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 ASB12Q8WXK4 309 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 CENPTQ96BT3 561 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 RBBP8Q99708 897 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 EBF2Q9HAK2 575 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 SMOXQ9NWM0 555 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 NSMCE4AQ9NXX6 385 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 CRLS1Q9UJA2 301 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 ZNF180Q9UJW8 692 aa21.35■■□□□ 1.01
TPM1-204ENST00000334895 CNOT6Q9ULM6 557 aaKnown RBP21.35■■□□□ 1.01
TPM1-204ENST00000334895 TLDC2A0PJX2 215 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 HMX2A2RU54 273 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 INHBAP08476 426 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 ACRV1P26436 265 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 SGCGQ13326 291 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 RASA2Q15283 850 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 IRF4Q15306 451 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 KRT71Q3SY84 523 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 SETMARQ53H47 684 aaPredicted RBP21.34■■□□□ 1.01
TPM1-204ENST00000334895 CNSTQ6PJW8 725 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 SDCCAG8Q86SQ7 713 aaPredicted RBP21.34■■□□□ 1.01
TPM1-204ENST00000334895 ZC3HC1Q86WB0 502 aaKnown RBP21.34■■□□□ 1.01
TPM1-204ENST00000334895 C1orf210Q8IVY1 113 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 CYP4X1Q8N118 509 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 LPGAT1Q92604 370 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 PPCSQ9HAB8 311 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 FZD3Q9NPG1 666 aa21.34■■□□□ 1.01
TPM1-204ENST00000334895 PSMC3IPQ9P2W1 217 aaPredicted RBP21.34■■□□□ 1.01
TPM1-204ENST00000334895 SLC31A1O15431 190 aa21.33■■□□□ 1.01
TPM1-204ENST00000334895 LAMTOR5O43504 91 aa21.33■■□□□ 1.01
TPM1-204ENST00000334895 OR1I1O60431 355 aa21.33■■□□□ 1.01
TPM1-204ENST00000334895 CDH16O75309 829 aa21.33■■□□□ 1.01
TPM1-204ENST00000334895 PCCBP05166 539 aa21.33■■□□□ 1.01
TPM1-204ENST00000334895 CSE1LP55060 971 aaKnown RBP21.33■■□□□ 1.01
TPM1-204ENST00000334895 LRRC14Q15048 493 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms