RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 HACD2Q6Y1H2 254 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ZBTB49Q6ZSB9 765 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 TAS1R1Q7RTX1 841 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 IFNEQ86WN2 208 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 TMEM173Q86WV6 379 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 CARM1Q86X55 608 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 MIER2Q8N344 545 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 OR2T3Q8NH03 318 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 UHRF1Q96T88 793 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 BPIFA1Q9NP55 256 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 RNF112Q9ULX5 631 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ZFP37Q9Y6Q3 630 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 NPEPPSL1A6NEC2 478 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ATP4BP51164 291 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ZNF140P52738 457 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 TYSND1Q2T9J0 566 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 FAM26DQ5JW98 314 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 RHEBL1Q8TAI7 183 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 FUBP1Q96AE4 644 aaKnown RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 TFB2MQ9H5Q4 396 aaKnown RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 VCX3AQ9NNX9 186 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 SDR39U1Q9NRG7 319 aaPredicted RBP13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 CHD5Q8TDI0 1954 aa13.35□□□□□ -0.27
TUBA1B-201ENST00000332858 ASPDHA6ND91 283 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 DLGAP1O14490 977 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NIPSNAP2O75323 286 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 GJB5O95377 273 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NDST3O95803 873 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 EPOP01588 193 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 MTHFD1P11586 935 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 BMP1P13497 986 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PAX3P23760 479 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 MAGEA11P43364 429 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 HSPA13P48723 471 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 CDH15P55291 814 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 YBEYP58557 167 aaPredicted RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 TXNL4AP83876 142 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 CREB5Q02930 508 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 MRPL58Q14197 206 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PLA2G4EQ3MJ16 856 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NHSL2Q5HYW2 709 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 FBXO39Q8N4B4 442 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 DUS3LQ96G46 650 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 CAAP1Q9H8G2 361 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 ABCD2Q9UBJ2 740 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 TSR3Q9UJK0 312 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NDUFAF1Q9Y375 327 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 TET1Q8NFU7 2136 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 ANGPT2O15123 496 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 EOMESO95936 686 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 ZFP36L2P47974 494 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 HK3P52790 923 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 GNA12Q03113 381 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PTPRNQ16849 979 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PAGE3Q5JUK9 113 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 RAB44Q7Z6P3 723 aaPredicted RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 SYVN1Q86TM6 617 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 EPHX4Q8IUS5 362 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 SIDT2Q8NBJ9 832 aaKnown RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 LRRC58Q96CX6 371 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 CDK15Q96Q40 435 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 C1orf50Q9BV19 199 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 GPR45Q9Y5Y3 372 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 KERAO60938 352 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NCK1P16333 377 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 LBPP18428 481 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 ATF6P18850 670 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 LCP2Q13094 533 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 GLT6D1Q7Z4J2 308 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 CBR4Q8N4T8 237 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 OR2T11Q8NH01 316 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 STAG3L4Q8TBR4 150 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 HBEGFQ99075 208 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 PIF1Q9H611 641 aa13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
TUBA1B-201ENST00000332858 F5H5T6 163 aa13.33□□□□□ -0.28
TUBA1B-201ENST00000332858 H3BNC9 293 aa13.33□□□□□ -0.28
TUBA1B-201ENST00000332858 BTN3A1O00481 513 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms