RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 FGF4P08620 206 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 PKMP14618 531 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 CES1P23141 567 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 VEPH1Q14D04 833 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 SPATA24Q86W54 205 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 HERC6Q8IVU3 1022 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 LILRA2Q8N149 483 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 TTC30BQ8N4P2 665 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 PHC3Q8NDX5 983 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 OR6K2Q8NGY2 324 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 NAT14Q8WUY8 206 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 TUBGCP5Q96RT8 1024 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 FEM1AQ9BSK4 669 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 SLC25A23Q9BV35 468 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 SEZ6LQ9BYH1 1024 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 C6orf203Q9P0P8 240 aaPredicted RBP14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 IQCF5A8MTL0 148 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 K7ERQ8 282 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 NRP2O60462 931 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 TSPAN12O95859 305 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 LINC00032P0C843 101 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 CTPS1P17812 591 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 PSMA3P25788 255 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 RHOAP61586 193 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 LCP2Q13094 533 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 KANK2Q63ZY3 851 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 TPGS2Q68CL5 300 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 TXNDC8Q6A555 127 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 ARL14EPQ8N8R7 260 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 ZNF784Q8NCA9 323 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 EEF1AKMT1Q8WVE0 214 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 ESAMQ96AP7 390 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 SLC45A3Q96JT2 553 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 ASB2Q96Q27 587 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 TM6SF2Q9BZW4 377 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 ZNF334Q9HCZ1 680 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 SARS2Q9NP81 518 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 MRGBPQ9NV56 204 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 VPS51Q9UID3 782 aa14.77□□□□□ -0.05
CLCNKA-201ENST00000331433 VPS26AO75436 327 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 PYGLP06737 847 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 SPATA31D3P0C874 917 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 UQCRBP14927 111 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 GPX3P22352 226 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 PRDX3P30048 256 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 CSKP41240 450 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TTPAP49638 278 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 STX1BP61266 288 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ATP6V0D1P61421 351 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 HTRA3P83110 453 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 SPATA31D4Q6ZUB0 917 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TAS2R42Q7RTR8 314 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ADAMTS19Q8TE59 1207 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TUBGCP3Q96CW5 907 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 EID2BQ96D98 161 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TMEM169Q96HH4 297 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TRMT6Q9UJA5 497 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TSR3Q9UJK0 312 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 DTNAQ9Y4J8 743 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 TIMM22Q9Y584 194 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 PDE4DIPQ5VU43 2346 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 COL4A6Q14031 1691 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 PRORSD1PA6NEY8 169 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ALPIP09923 528 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 CHRM3P20309 590 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 RNF220Q5VTB9 566 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ANKS6Q68DC2 871 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ZFP1Q6P2D0 407 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 RETREG3Q86VR2 466 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 PHYKPLQ8IUZ5 450 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 CPNE9Q8IYJ1 553 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 CD200R1Q8TD46 325 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 ASB9Q96DX5 294 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 CCDC97Q96F63 343 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 LINGO1Q96FE5 620 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 LRGUKQ96M69 825 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 GCNAQ96QF7 691 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 SPAG4Q9NPE6 437 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 BCAP29Q9UHQ4 241 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 RIMS3Q9UJD0 308 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 STOML2Q9UJZ1 356 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 SARDHQ9UL12 918 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 SUFUQ9UMX1 484 aa14.76□□□□□ -0.05
CLCNKA-201ENST00000331433 NR5A2O00482 541 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 TXNDC9O14530 226 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 GREM1O60565 184 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 RPS17P08708 135 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 VCLP18206 1134 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 HK3P52790 923 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 XIAPP98170 497 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 TLE2Q04725 743 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 CDH18Q13634 790 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 IKBKEQ14164 716 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 ADGRE1Q14246 886 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 TRIM25Q14258 630 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 PITRM1Q5JRX3 1037 aa14.75□□□□□ -0.05
CLCNKA-201ENST00000331433 UGT3A1Q6NUS8 523 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms