RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 COX4I2Q96KJ9 171 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ARHGAP9Q9BRR9 750 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CHIAQ9BZP6 476 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ASB7Q9H672 318 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 COPS7AQ9UBW8 275 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 COLEC10Q9Y6Z7 277 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ALOX5P09917 674 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 DHPSP49366 369 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 LYPLAL1Q5VWZ2 237 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 C17orf64Q86WR6 236 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CYB5D2Q8WUJ1 264 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CD101Q93033 1021 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 CD163L1Q9NR16 1453 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 SHOX2O60902 331 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 NR0B1P51843 470 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 DGKEP52429 567 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 RAB25P57735 213 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 QPRTQ15274 297 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GRIK5Q16478 980 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 FAM83AQ86UY5 434 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ADAMTS15Q8TE58 950 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GTPBP3Q969Y2 492 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 FCRL2Q96LA5 508 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 OR51V1Q9H2C8 321 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 SIGLEC16A6NMB1 481 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GRM6O15303 877 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 TREHO43280 583 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ERBB2P04626 1255 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 RPS6KA3P51812 740 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CDKL1Q00532 357 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 DNASE1L3Q13609 305 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 UGCGQ16739 394 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 TOR1AIP1Q5JTV8 583 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CMC1Q7Z7K0 106 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 RIOX1Q9H6W3 641 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 H3BM21 787 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 PDE2AO00408 941 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 FGBP02675 491 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ETS2P15036 469 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 SP2Q02086 613 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ALG1LQ6GMV1 187 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 AMIGO1Q86WK6 493 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 OR4K2Q8NGD2 314 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 HTRA1Q92743 480 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 TRAPPC9Q96Q05 1148 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GFM1Q96RP9 751 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 IKZF4Q9H2S9 585 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 PRDM12Q9H4Q4 367 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 IFT46Q9NQC8 304 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 MOCS1Q9NZB8 636 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 PGRMC2O15173 223 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 PBX3P40426 434 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 STAT5AP42229 794 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.72
CLN8-201ENST00000331222 CLCNKBP51801 687 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 AKR1D1P51857 326 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 CAPZA1P52907 286 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 GMFBP60983 142 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 NAE1Q13564 534 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 CLEC6AQ6EIG7 209 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 GPR65Q8IYL9 337 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 ATAD1Q8NBU5 361 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 SLC25A36Q96CQ1 311 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 EHD4Q9H223 541 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 PNPOQ9NVS9 261 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 NCDNQ9UBB6 729 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 DMTF1Q9Y222 760 aa10.52□□□□□ -0.72
CLN8-201ENST00000331222 EIF1AYO14602 144 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 CCNDBP1O95273 360 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 MT-CYBP00156 380 aaPredicted RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 RFX5P48382 616 aaPredicted RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 ZNF844Q08AG5 666 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 SQLEQ14534 574 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 ADRM1Q16186 407 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 RCN3Q96D15 328 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 COQ8BQ96D53 544 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 Q96MT0 163 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 UROC1Q96N76 676 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 DPYSL5Q9BPU6 564 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TTPALQ9BTX7 342 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 AGO3Q9H9G7 860 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 AK5Q9Y6K8 562 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 LGR5O75473 907 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 SEMA3DO95025 777 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 PAEPP09466 180 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 SNAPC1Q16533 368 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 NKAPQ8N5F7 415 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 CDH7Q9ULB5 785 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 KCNE2Q9Y6J6 123 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 ASTN2O75129 1339 aaPredicted RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 SERPINB7O75635 380 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TGFBR2P37173 567 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 PSMD7P51665 324 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 PURAQ00577 322 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms