RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 UPK1AO00322 258 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 AXIN1O15169 862 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 KCNA5P22460 613 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 EMX1Q04741 257 aaPredicted RBP24.22■■□□□ 1.47
SOX1-201ENST00000330949 CD47Q08722 323 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 KRR1Q13601 381 aaKnown RBP24.22■■□□□ 1.47
SOX1-201ENST00000330949 C14orf80Q86SX3 495 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 ZDHHC13Q8IUH4 622 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 SLC22A9Q8IVM8 553 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 CCDC103Q8IW40 242 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 CNTN4Q8IWV2 1026 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 DNAJB14Q8TBM8 379 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 APOL2Q9BQE5 337 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 PRELID1Q9Y255 219 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 ZBBXA8MT70 800 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 TULP3O75386 442 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 TCF3P15923 654 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 EEFSECP57772 596 aaKnown RBP24.22■■□□□ 1.47
SOX1-201ENST00000330949 NFYCQ13952 458 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 CTU2Q2VPK5 515 aaKnown RBP24.22■■□□□ 1.47
SOX1-201ENST00000330949 RABL3Q5HYI8 236 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 STEAP3Q658P3 488 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 MFSD6LQ8IWD5 586 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 RIMKLAQ8IXN7 391 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 RNF139Q8WU17 664 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 C3orf30Q96M34 536 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 KIFC1Q9BW19 673 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 TRIM8Q9BZR9 551 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 A0A1W2PQ67 120 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 TAS2R39P59534 338 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 CSHL1Q14406 222 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 WDR45BQ5MNZ6 344 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 RFPL4BQ6ZWI9 263 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 ZNF300Q96RE9 604 aaPredicted RBP24.21■■□□□ 1.47
SOX1-201ENST00000330949 FZD10Q9ULW2 581 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 HUS1O60921 280 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 IL12AP29459 219 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 SEPHS1P49903 392 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 TNFAIP2Q03169 654 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 CDH17Q12864 832 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 PAFAH1B3Q15102 231 aaKnown RBP24.21■■□□□ 1.47
SOX1-201ENST00000330949 PKDCCQ504Y2 493 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 PPP1R26Q5T8A7 1209 aaPredicted RBP24.21■■□□□ 1.47
SOX1-201ENST00000330949 DESI1Q6ICB0 168 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 BEND5Q7L4P6 421 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 STRADAQ7RTN6 431 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 ANKK1Q8NFD2 765 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 ALOXE3Q9BYJ1 711 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 CCDC177Q9NQR7 707 aaPredicted RBP24.21■■□□□ 1.47
SOX1-201ENST00000330949 CHST12Q9NRB3 414 aa24.21■■□□□ 1.47
SOX1-201ENST00000330949 OAS3Q9Y6K5 1087 aaKnown RBP24.21■■□□□ 1.47
SOX1-201ENST00000330949 TYW5A2RUC4 315 aaKnown RBP24.2■■□□□ 1.47
SOX1-201ENST00000330949 TBX1O43435 398 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 CRYZL1O95825 349 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 AGXTP21549 392 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 DNAJB2P25686 324 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 CTBP1Q13363 440 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 RPS6KA2Q15349 733 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 AGAP9Q5VTM2 703 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 SLC35F5Q8WV83 523 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 HPDLQ96IR7 371 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 GSTO2Q9H4Y5 243 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 FAM124BQ9H5Z6 455 aaPredicted RBP24.2■■□□□ 1.47
SOX1-201ENST00000330949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.2■■□□□ 1.47
SOX1-201ENST00000330949 N6AMT1Q9Y5N5 214 aa24.2■■□□□ 1.47
SOX1-201ENST00000330949 NDST3O95803 873 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 CCDC159P0C7I6 412 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 PLK1P53350 603 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 IST1P53990 364 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 EEF1DP3Q658K8 133 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 DENND6AQ8IWF6 608 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.2■■□□□ 1.46
SOX1-201ENST00000330949 YIPF6Q96EC8 236 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 PHF21BQ96EK2 531 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 MLPHQ9BV36 600 aaPredicted RBP24.2■■□□□ 1.46
SOX1-201ENST00000330949 IGSF5Q9NSI5 407 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 HTR1EP28566 365 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 LAMTOR4Q0VGL1 99 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 FKBP9P1Q75LS8 142 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 FAM131BQ86XD5 332 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 MCFD2Q8NI22 146 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 TSPEARQ8WU66 669 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 PROX1Q92786 737 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 NSMCE2Q96MF7 247 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 AS3MTQ9HBK9 375 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 SDR39U1Q9NRG7 319 aaPredicted RBP24.2■■□□□ 1.46
SOX1-201ENST00000330949 NPAP1Q9NZP6 1156 aa24.2■■□□□ 1.46
SOX1-201ENST00000330949 NFKBIEO00221 500 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 UBFD1O14562 309 aaKnown RBP24.19■■□□□ 1.46
SOX1-201ENST00000330949 TNPO2O14787 897 aaKnown RBP24.19■■□□□ 1.46
SOX1-201ENST00000330949 KRT6AP02538 564 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 KRT6BP04259 564 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 PGK2P07205 417 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 RBP1P09455 135 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 BDNFP23560 247 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 SOX11P35716 441 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 POU4F1Q01851 419 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 BLOC1S3Q6QNY0 202 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 PLD3Q8IV08 490 aa24.19■■□□□ 1.46
SOX1-201ENST00000330949 CLYBLQ8N0X4 340 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms