RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 SNX20Q7Z614 316 aa12.72□□□□□ -0.37
RAB11FIP1-202ENST00000330843 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CCDC163A0A0D9SF12 145 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TTC34A8MYJ7 566 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SEPT4O43236 478 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ANXA5P08758 320 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 KDELR1P24390 212 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 VWA5B1Q5TIE3 1220 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZNF782Q6ZMW2 699 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZNF517Q6ZMY9 492 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 IFNGP01579 166 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ARP10275 920 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 UQCRC1P31930 480 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 INSCQ1MX18 579 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 WSCD2Q2TBF2 565 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 BTBD16Q32M84 506 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SEMA3GQ9NS98 782 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TRHDEQ9UKU6 1024 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 THP07101 528 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 MAGEA11P43364 429 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CYP2A13Q16696 494 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 GRIN3AQ8TCU5 1115 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SNX33Q8WV41 574 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TBX5Q99593 518 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 MRPL57Q9BQC6 102 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SOHLH2Q9NX45 425 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 C17orf102A2RUQ5 167 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PLK4O00444 970 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CRYZL1O95825 349 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 IDO1P14902 403 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CD53P19397 219 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CBR4Q8N4T8 237 aa12.71□□□□□ -0.37
RAB11FIP1-202ENST00000330843 FPGTO14772 594 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 OR1I1O60431 355 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 GIMD1P0DJR0 217 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ASB8Q9H765 288 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 FBXL3Q9UKT7 428 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 MYO5CQ9NQX4 1742 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 H3BSH0 61 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ZNF208O43345 1280 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ITPKBP27987 946 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 RORCP51449 518 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 NEPROQ6NW34 567 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 WDR49Q8IV35 697 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 PPP3R2Q96LZ3 170 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 COLEC11Q9BWP8 271 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.38
RAB11FIP1-202ENST00000330843 H7C4K7 107 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 MEN1O00255 615 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ZNF286BP0CG31 522 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 PFKPQ01813 784 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 LACTB2Q53H82 288 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 RAP1GAP2Q684P5 730 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ZC3HC1Q86WB0 502 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 NAT16Q8N8M0 369 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CD101Q93033 1021 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 TEFMQ96QE5 360 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 MAP4K5Q9Y4K4 846 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 NDUFS2O75306 463 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CDH13P55290 713 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 REP15Q6BDI9 236 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 USP30Q70CQ3 517 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 USP43Q70EL4 1123 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 ZNF627Q7L945 461 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CD302Q8IX05 232 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 DRAXINQ8NBI3 349 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CEP76Q8TAP6 659 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 BARD1Q99728 777 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 SLC22A4Q9H015 551 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 POLE4Q9NR33 117 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 SNX15Q9NRS6 342 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 PSME2Q9UL46 239 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 PCDHGA11Q9Y5H2 935 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 UGT2B4P06133 528 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 DNASE1L1P49184 302 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CDKAL1Q5VV42 579 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 IL25Q9H293 177 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 CCDC177Q9NQR7 707 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 KLF15Q9UIH9 416 aa12.7□□□□□ -0.38
RAB11FIP1-202ENST00000330843 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms