RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR1I1O60431 355 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 RNASEH2AO75792 299 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 TSPAN12O95859 305 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PYGLP06737 847 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 TRAP1Q12931 704 aaKnown RBP14.48□□□□□ -0.09
TPM3-206ENST00000330188 GRM2Q14416 872 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 PDK3Q15120 406 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 FBXO48Q5FWF7 155 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 CTSL3PQ5NE16 218 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 ANKS6Q68DC2 871 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 NCEH1Q6PIU2 408 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 LAYNQ6UX15 382 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 RETREG3Q86VR2 466 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 DDIASQ8IXT1 998 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 CATSPER1Q8NEC5 780 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 ATP6V1E2Q96A05 226 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 IGSF21Q96ID5 467 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 TRAPPC9Q96Q05 1148 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 ADGRE3Q9BY15 652 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 SEZ6LQ9BYH1 1024 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 BPIFA1Q9NP55 256 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 VPS9D1Q9Y2B5 631 aa14.48□□□□□ -0.09
TPM3-206ENST00000330188 A0A0J9YYE9 177 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 SYCE1LA8MT33 242 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 BBIP1A8MTZ0 92 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 NIPSNAP2O75323 286 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 VPS26AO75436 327 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 ABLIM3O94929 683 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 C1RP00736 705 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 TTPAP49638 278 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 TLR1Q15399 786 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 IL23RQ5VWK5 629 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 KIAA1841Q6NSI8 718 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 UGT2A3Q6UWM9 527 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 FAM43BQ6ZT52 329 aaPredicted RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 SIDT2Q8NBJ9 832 aaKnown RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 ZNF461Q8TAF7 563 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 ROPN1LQ96C74 230 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CYP2S1Q96SQ9 504 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 SEMA4BQ9NPR2 832 aaPredicted RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 POLG2Q9UHN1 485 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 BTRCQ9Y297 605 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 YIPF1Q9Y548 306 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 A0A0U1RQS6 177 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 H7C0S8 307 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 BTN3A1O00481 513 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 NR5A2O00482 541 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 STX16O14662 325 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 STX7O15400 261 aaKnown RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 DENRO43583 198 aaKnown RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 KLK8O60259 260 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CXCL10P02778 98 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 LINC00032P0C843 101 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CD9P21926 228 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 MZF1P28698 734 aaPredicted RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 AGTR2P50052 363 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CLCN4P51793 760 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CCL23P55773 120 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 NME5P56597 212 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 ZRANB3Q5FWF4 1079 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 SAMD4BQ5PRF9 694 aaKnown RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 C6orf10Q5SRN2 563 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 MARVELD2Q8N4S9 558 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 CD200R1Q8TD46 325 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 TRMT2BQ96GJ1 504 aaKnown RBP14.47□□□□□ -0.09
TPM3-206ENST00000330188 SLC39A3Q9BRY0 314 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 C1QTNF3Q9BXJ4 246 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 HACD3Q9P035 362 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 HSFX1Q9UBD0 423 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 STOML2Q9UJZ1 356 aa14.47□□□□□ -0.09
TPM3-206ENST00000330188 PQBP1O60828 265 aaKnown RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 DNAJA2O60884 412 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 GNRH1P01148 92 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 LBPP18428 481 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 PEX19P40855 299 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 CCNHP51946 323 aaPredicted RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 SLC7A2P52569 658 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 ECT2LQ008S8 904 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 RHDQ02161 417 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 ZNF783Q6ZMS7 281 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.46□□□□□ -0.092e-6■■□□□ 14.5
TPM3-206ENST00000330188 HERC6Q8IVU3 1022 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 ST13P4Q8IZP2 240 aaPredicted RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 MIER2Q8N344 545 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 ZNF483Q8TF39 744 aaPredicted RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 TUBGCP3Q96CW5 907 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 ZFRQ96KR1 1074 aaKnown RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 GBP5Q96PP8 586 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 GPATCH1Q9BRR8 931 aaKnown RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 FAM192AQ9GZU8 254 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 SMPD4Q9NXE4 827 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 MAP10Q9P2G4 905 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 TRMT6Q9UJA5 497 aaKnown RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 RAB26Q9ULW5 256 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 FNDC3AQ9Y2H6 1198 aaKnown RBP14.46□□□□□ -0.09
TPM3-206ENST00000330188 COL4A6Q14031 1691 aa14.46□□□□□ -0.09
TPM3-206ENST00000330188 TCRBV3S1A0A5B6 114 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 NCF1BA6NI72 391 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms