RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 LSP1P33241 339 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 ABL2P42684 1182 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 MAXP61244 160 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 RPL26P61254 145 aaKnown RBP16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CRADDP78560 199 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC18A2Q05940 514 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 KIAA0408Q6ZU52 694 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 ZSWIM9Q86XI8 627 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CNTN4Q8IWV2 1026 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CEP76Q8TAP6 659 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 NETO1Q8TDF5 533 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CABS1Q96KC9 395 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 GTPBP2Q9BX10 602 aaKnown RBP16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 NUSAP1Q9BXS6 441 aaKnown RBP16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 EPN3Q9H201 632 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CHRAC1Q9NRG0 131 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 HACD3Q9P035 362 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 RPL26L1Q9UNX3 145 aaKnown RBP16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 PCNX2A6NKB5 2137 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 ADRB3P13945 408 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 TIMP2P16035 220 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 KRT4P19013 534 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 ITGB7P26010 798 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 CCR5P51681 352 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 IL9RQ01113 521 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 GRIK2Q13002 908 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 FGL2Q14314 439 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 IHHQ14623 411 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 GRM3Q14832 879 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 PRAMEF14Q5SWL7 426 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 SEL1L3Q68CR1 1132 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 TRMT10BQ6PF06 316 aaKnown RBP16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 GDPD4Q6W3E5 623 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 GALNT7Q86SF2 657 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 CAMK1DQ8IU85 385 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 APOL2Q9BQE5 337 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 TREX1Q9NSU2 369 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 CDV3Q9UKY7 258 aaKnown RBP16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 FADS3Q9Y5Q0 445 aa16.4■□□□□ 0.22
PDLIM1-201ENST00000329399 PLXNA2O75051 1894 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 TRPM6Q9BX84 2022 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 A0A1W2PQ67 120 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 A0A1W2PQU0 124 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 A0A1W2PR77 199 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 MROH6A6NGR9 719 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 CXorf49A8MYA2 514 aaPredicted RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SLC7A4O43246 635 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 TYROBPO43914 113 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 RNGTTO60942 597 aaKnown RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 CRTAMO95727 393 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 TPH1P17752 444 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SCNN1BP51168 640 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 LIMK1P53667 647 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 GUCY1A3Q02108 690 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SEMG2Q02383 582 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SFSWAPQ12872 951 aaKnown RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 POU6F1Q14863 301 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 EFTUD2Q15029 972 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■■■ 31.1
PDLIM1-201ENST00000329399 SEPT7Q16181 437 aaKnown RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 PCSK7Q16549 785 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 KIF19Q2TAC6 998 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 ZNF284Q2VY69 593 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SIRPB2Q5JXA9 342 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 TSTD2Q5T7W7 516 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 TEDDM1Q5T9Z0 273 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 LCA5Q86VQ0 697 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 DYDC1Q8WWB3 177 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 FCRL3Q96P31 734 aaPredicted RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SMYD2Q9NRG4 433 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 C20orf96Q9NUD7 363 aaPredicted RBP16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 SNX11Q9Y5W9 270 aa16.39■□□□□ 0.21
PDLIM1-201ENST00000329399 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 TRIM49D1C9J1S8 452 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 SLC31A1O15431 190 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 IGSF6O95976 241 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 PRKCGP05129 697 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 ATXN1LP0C7T5 689 aaKnown RBP16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 GNSP15586 552 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 PSMA3P25788 255 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 CCT5P48643 541 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 NEK3P51956 506 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 MSLNQ13421 630 aaPredicted RBP16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 UAP1L1Q3KQV9 507 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 FBXL19Q6PCT2 694 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 SRLQ86TD4 932 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 MRRFQ96E11 262 aaKnown RBP16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 MFSD3Q96ES6 412 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 TRIB3Q96RU7 358 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 MYOCQ99972 504 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
PDLIM1-201ENST00000329399 FZD3Q9NPG1 666 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms