RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 C1orf127Q8N9H9 656 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 GALNT6Q8NCL4 622 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 TATDN2Q93075 761 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 TMA16Q96EY4 203 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 SGSM3Q96HU1 749 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 RUNDC3BQ96NL0 473 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 FCRL4Q96PJ5 515 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 OSBPL9Q96SU4 736 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 PCDHB18PQ96TA0 734 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CTRCQ99895 268 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 DNAI2Q9GZS0 605 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 MIS12Q9H081 205 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ADGRE2Q9UHX3 823 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 SCINQ9Y6U3 715 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 UNC13CQ8NB66 2214 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 PRRC2CQ9Y520 2896 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CCDC188H7C350 402 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ZNF185O15231 689 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 IRAK2O43187 625 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CTAG2O75638 210 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CELA2BP08218 269 aaPredicted RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 IL4RP24394 825 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 POLR2BP30876 1174 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ARCN1P48444 511 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 KCNK10P57789 538 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 RPS15P62841 145 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 NKX6-1P78426 367 aaPredicted RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ECT2LQ008S8 904 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CBLBQ13191 982 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 AMZ1Q400G9 498 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 PPP1R15BQ5SWA1 713 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 LRRC38Q5VT99 294 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 CAPN12Q6ZSI9 719 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 HIPK1Q86Z02 1210 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 MCOLN2Q8IZK6 566 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ARFGAP1Q8N6T3 406 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 SCAMP5Q8TAC9 235 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 C1QTNF2Q9BXJ5 285 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 SIDT1Q9NXL6 827 aaKnown RBP6.63□□□□□ -1.35
CSTF3-201ENST00000323959 AGAP1Q9UPQ3 857 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 SNX9Q9Y5X1 595 aa6.63□□□□□ -1.35
CSTF3-201ENST00000323959 ZNF487B1APH4 448 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 DDX3YO15523 660 aaKnown RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CALB1P05937 261 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 TMEM191BP0C7N4 346 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 DLATP10515 647 aaKnown RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CTNNA1P35221 906 aaKnown RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SULT2A1Q06520 285 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 MYBPC3Q14896 1274 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 LLGL1Q15334 1064 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 DENND1CQ8IV53 801 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 PPM1KQ8N3J5 372 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SLCO2A1Q92959 643 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SMARCD1Q96GM5 515 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 KLF6Q99612 283 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 NCAPGQ9BPX3 1015 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 UBXN6Q9BZV1 441 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 RDH14Q9HBH5 336 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 TMEM30AQ9NV96 361 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 TRIM10Q9UDY6 481 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 TGP01266 2768 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CTAGE15A4D2H0 777 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CCDC151A5D8V7 595 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 RAD51BO15315 384 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 HCRTO43612 131 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 PALMO75781 387 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 PCDH8O95206 1070 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CTAGE8P0CG41 777 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 VDRP11473 427 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 MMP8P22894 467 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 TRIP4Q15650 581 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CNGA2Q16280 664 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CYP1B1Q16678 543 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SEL1L3Q68CR1 1132 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CHSY3Q70JA7 882 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CTAGE6Q86UF2 777 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 ZDHHC17Q8IUH5 632 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CTAGE4Q8IX94 777 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 EID3Q8N140 333 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SCML4Q8N228 414 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 ARMC2Q8NEN0 867 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 GOT1L1Q8NHS2 421 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 SLC35G2Q8TBE7 412 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 IP6K3Q96PC2 410 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 NAP1L3Q99457 506 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 MTMR12Q9C0I1 747 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 MRPL47Q9HD33 250 aaKnown RBP6.62□□□□□ -1.35
CSTF3-201ENST00000323959 DUSP10Q9Y6W6 482 aa6.62□□□□□ -1.35
CSTF3-201ENST00000323959 CACNA1CQ13936 2221 aa6.61□□□□□ -1.35
CSTF3-201ENST00000323959 PSTPIP1O43586 416 aa6.61□□□□□ -1.35
CSTF3-201ENST00000323959 CST3P01034 146 aaPredicted RBP6.61□□□□□ -1.35
CSTF3-201ENST00000323959 FTLP02792 175 aaPredicted RBP6.61□□□□□ -1.35
CSTF3-201ENST00000323959 ANKRD34CP0C6C1 535 aa6.61□□□□□ -1.35
CSTF3-201ENST00000323959 MSX1P28360 303 aa6.61□□□□□ -1.35
CSTF3-201ENST00000323959 CSF2RBP32927 897 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms