RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PARP8Q8N3A8 854 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GPR21Q99679 349 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 RBM4BQ9BQ04 359 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 RBM4Q9BWF3 364 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CFAP97Q9P2B7 532 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 POLR1DQ9Y2S0 133 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PMM2O15305 246 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CDH4P55283 916 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 METTL21CQ5VZV1 264 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 IKBIPQ70UQ0 350 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FIBCD1Q8N539 461 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 POC5Q8NA72 575 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 MTMR14Q8NCE2 650 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 OR8D1Q8WZ84 308 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC25A51Q9H1U9 297 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ZDHHC18Q9NUE0 388 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 MAT2BQ9NZL9 334 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 TREHO43280 583 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 FKBP1BP68106 108 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NDUFAF6Q330K2 333 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 MPPE1Q53F39 396 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TSTD2Q5T7W7 516 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 COQ7Q99807 217 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SNX10Q9Y5X0 201 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF780BQ9Y6R6 833 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NDST3O95803 873 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 GNPDA1P46926 289 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 DUSP4Q13115 394 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ERICH5Q6P6B1 374 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 GALNT5Q7Z7M9 940 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 RALGPS2Q86X27 583 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 MAB21L3Q8N8X9 362 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 LPGAT1Q92604 370 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TIFAQ96CG3 184 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CADM1Q9BY67 442 aaKnown RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 DNAJC11Q9NVH1 559 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 IRGMA1A4Y4 181 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 M0R2N6 131 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 L1CAMP32004 1257 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CDK9P50750 372 aaKnown RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 THOP1P52888 689 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TAS2R41P59536 307 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 QPRTQ15274 297 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 UBR7Q8N806 425 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF483Q8TF39 744 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 AP3S1Q92572 193 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ROPN1LQ96C74 230 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PCED1BQ96HM7 432 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 DENND2DQ9H6A0 471 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SSR3Q9UNL2 185 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 KCNE2Q9Y6J6 123 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 IL1BP01584 269 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CRTC3Q6UUV7 619 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 RTL3Q8N8U3 475 aaKnown RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SPATA22Q8NHS9 363 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PIH1D2Q8WWB5 315 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TEFMQ96QE5 360 aaKnown RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF541Q9H0D2 1346 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PLIN3O60664 434 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 IFNA16P05015 189 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 BUD31P41223 144 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 DMPKQ09013 629 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CAPN13Q6MZZ7 669 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 KBTBD2Q8IY47 623 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CAPSLQ8WWF8 208 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CIB1Q99828 191 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 IGSF9Q9P2J2 1179 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NR2E1Q9Y466 385 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PCDHGA4Q9Y5G9 962 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 FADS3Q9Y5Q0 445 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TULP2O00295 520 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 AP3D1O14617 1153 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 TP73O15350 636 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 CLDN9O95484 217 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC35G4P0C7Q5 338 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 MYL9P24844 172 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 GABRR2P28476 465 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NDUFV1P49821 464 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 NRG1Q02297 640 aaPredicted RBP10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 SP3Q02447 781 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 FAM46CQ5VWP2 391 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 RFWD3Q6PCD5 774 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 PAOXQ6QHF9 649 aa10.86□□□□□ -0.67
SNRNP200-201ENST00000323853 LDB1Q86U70 411 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms