RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SLC9A3R1O14745 358 aaPredicted RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 NRG3P56975 720 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 LARS2Q15031 903 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 LDLRAP1Q5SW96 308 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 CSGALNACT1Q8TDX6 532 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 CLP1Q92989 425 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 COMMD4Q9H0A8 199 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 BANF1O75531 89 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MAGP20916 626 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 UNC93AQ86WB7 457 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MAP4K3Q8IVH8 894 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 FAM13CQ8NE31 585 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MND1Q9BWT6 205 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 IL25Q9H293 177 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ELOVL7A1L3X0 281 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MYBL2P10244 700 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 PHC1P78364 1004 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 BLMHQ13867 455 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 PABPC1LQ4VXU2 614 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 TTC29Q8NA56 475 aaPredicted RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 RNF157Q96PX1 679 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 hCG_1818297A0A087WSY0 165 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CABYRO75952 493 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CDKL1Q00532 357 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CA9Q16790 459 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 C15orf59Q2T9L4 293 aaPredicted RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 PPP1R15BQ5SWA1 713 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 TLL2Q9Y6L7 1015 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 INSRRP14616 1297 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 SOX10P56693 466 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 GCNT6Q5T4J0 391 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 FAM91A1Q658Y4 838 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CCDC107Q8WV48 283 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 IL1RAPQ9NPH3 570 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 EIF3KQ9UBQ5 218 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ERBB2P04626 1255 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 AIF1P55008 147 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF567Q8N184 647 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 PRELID2Q8N945 189 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 RBM15BQ8NDT2 890 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 AKAP1Q92667 903 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF639Q9UID6 485 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 PDE10AQ9Y233 779 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CHKAP35790 457 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 GK5Q6ZS86 529 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 C16orf59Q7L2K0 433 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 SNX33Q8WV41 574 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 UFD1Q92890 307 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC22A4Q9H015 551 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 NKIRAS2Q9NYR9 191 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 SPEF1Q9Y4P9 236 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ANXA2P2A6NMY6 339 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ANXA2P07355 339 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 KLRC2P26717 231 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ARF3P61204 181 aaPredicted RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 ARF1P84077 181 aaKnown RBP16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 CCNYL2Q5T2Q4 361 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 TAS2R14Q9NYV8 317 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 TMX2Q9Y320 296 aa16.8■□□□□ 0.28
SMCHD1-201ENST00000320876 MAGEA12P43365 314 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 LAPTM4BQ86VI4 370 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TRAV19A0A0A6YYK7 116 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 OR2AT4A6NND4 320 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC22A1O15245 554 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 PRMT3O60678 531 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 LYPLA1O75608 230 aaPredicted RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 NTSR2O95665 410 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 KCTD8Q6ZWB6 473 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 CYP4X1Q8N118 509 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 OR10H5Q8NGA6 315 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 EXO5Q9H790 373 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 CPSF6Q16630 551 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 AP2M1Q96CW1 435 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 C7orf26Q96N11 449 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 A8MUI8 341 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 PDCD5O14737 125 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 KDM4BO94953 1096 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 UROSP10746 265 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TSPAN8P19075 237 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ALDH4A1P30038 563 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 CDH8P55286 799 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 SEC23AQ15436 765 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 OR2L3Q8NG85 312 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 AARSD1Q9BTE6 412 aaKnown RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 MAGEE1Q9HCI5 957 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ARL8BQ9NVJ2 186 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 INTS10Q9NVR2 710 aaKnown RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ATP6AP2A0A1C7CYW4 349 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ATP6AP2O75787 350 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 APOL3O95236 402 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 IFI30P13284 250 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 KIR3DL1P43629 444 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms