RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 REXO5Q96IC2 774 aaKnown RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 ATP13A3Q9H7F0 1226 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 REEP1Q9H902 201 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 LIN28AQ9H9Z2 209 aaKnown RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 C6orf203Q9P0P8 240 aaPredicted RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 CNTN6Q9UQ52 1028 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 ANKDD1BA6NHY2 528 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 RHOQP17081 205 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 CRHR2Q13324 411 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 TP53BP2Q13625 1128 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 REP15Q6BDI9 236 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 RAET1GQ6H3X3 334 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 ADAMTSL2Q86TH1 951 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 TPK1Q9H3S4 243 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 NOL6Q9H6R4 1146 aaKnown RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 IGSF9Q9P2J2 1179 aa16.41■□□□□ 0.22
CLIP4-201ENST00000320081 ZNF490Q9ULM2 529 aaPredicted RBP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLIP4-201ENST00000320081 NUP98P52948 1817 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 SORBS2O94875 1100 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 FTH1P02794 183 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 CATP04040 527 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 GKP32189 559 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 DGKQP52824 942 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 HNRNPDQ14103 355 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 DGKKQ5KSL6 1271 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 ITIH5Q86UX2 942 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 ZC3HC1Q86WB0 502 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 BBS7Q8IWZ6 715 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 MAGEC3Q8TD91 643 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 SLC7A5P2Q9GIP4 190 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 SH3GLB1Q9Y371 365 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 CNOT3O75175 753 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 PRMT9Q6P2P2 845 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 NUDT18Q6ZVK8 323 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 ZNF558Q96NG5 402 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 TSEN34Q9BSV6 310 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 REXO4Q9GZR2 422 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 HIPK3Q9H422 1215 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 TNPO3Q9Y5L0 923 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 PTGDR2Q9Y5Y4 395 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 E7ENX8 843 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 ADCY6O43306 1168 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 POLR2EP19388 210 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 NR1H2P55055 460 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 COPG1Q9Y678 874 aaKnown RBP16.4■□□□□ 0.22
CLIP4-201ENST00000320081 CACNA1CQ13936 2221 aa16.4■□□□□ 0.22
CLIP4-201ENST00000320081 LRRC14BA6NHZ5 514 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 IMPDH2P12268 514 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 ITGAXP20702 1163 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 ALFQ53S48 1182 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 AAGABQ6PD74 315 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 PGAM4Q8N0Y7 254 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.22
CLIP4-201ENST00000320081 UPF1Q92900 1129 aaKnown RBP eCLIP16.39■□□□□ 0.22
CLIP4-201ENST00000320081 C16orf70Q9BSU1 422 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.22
CLIP4-201ENST00000320081 GTF2A1LQ9UNN4 478 aa16.39■□□□□ 0.22
CLIP4-201ENST00000320081 COL1A2P08123 1366 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 LRRC37A3O60309 1634 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 CDC7O00311 574 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 IFRD1O00458 451 aaPredicted RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 OTCP00480 354 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 EIF2S1P05198 315 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 RRM2P31350 389 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 SNRPD1P62314 119 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 DCTN2Q13561 401 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 PCLAFQ15004 111 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 ADRM1Q16186 407 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 CCDC157Q569K6 752 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 UBE2R2Q712K3 238 aaPredicted RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 STK40Q8N2I9 435 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 ZNF540Q8NDQ6 660 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 WDR48Q8TAF3 677 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 DTNBP1Q96EV8 351 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 RAD18Q9NS91 495 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 TRAFD1O14545 582 aaPredicted RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 TOR1BO14657 336 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 POU2F1P14859 743 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 IDO1P14902 403 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 CYP3A5P20815 502 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 ROR2Q01974 943 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 SERPINA13PQ6UXR4 307 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 SPPL2BQ8TCT7 592 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 MTERF1Q99551 399 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 MIPEPQ99797 713 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 ABCB10Q9NRK6 738 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 STK39Q9UEW8 545 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 OGDHLQ9ULD0 1010 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 NOBOXO60393 691 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 WARSP23381 471 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 FAM43BQ6ZT52 329 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms