RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 DOK6Q6PKX4 331 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 LAYNQ6UX15 382 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 SERPINA9Q86WD7 417 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 LRRC6Q86X45 466 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 CILP2Q8IUL8 1156 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 MAML2Q8IZL2 1156 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 FBXL6Q8N531 539 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 BIRC7Q96CA5 298 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 SGK2Q9HBY8 427 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 PREBQ9HCU5 417 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 MBD1Q9UIS9 605 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 IKBKGQ9Y6K9 419 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 TNFRSF10AO00220 468 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 SCAMP1O15126 338 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 INHBAP08476 426 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 ABHD2P08910 425 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 AKT1P31749 480 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 MSH2P43246 934 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 LRRC14Q15048 493 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 TMED2Q15363 201 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 KLHL38Q2WGJ6 581 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 TMEM259Q4ZIN3 620 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 KIAA1161Q6NSJ0 714 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 CBARPQ8N350 705 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 CLDN19Q8N6F1 224 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 ACVR1CQ8NER5 493 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 PLEKHG4BQ96PX9 1271 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 LGR4Q9BXB1 951 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 VPS18Q9P253 973 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 FAM8A1Q9UBU6 413 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 FBXO5Q9UKT4 447 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 TMPRSS11EQ9UL52 423 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 NFS1Q9Y697 457 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 ABCA7Q8IZY2 2146 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 EML5Q05BV3 1969 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 PSMD11O00231 422 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 SOD1P00441 154 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 AHSGP02765 367 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 NUDT17P0C025 328 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 GABRB3P28472 473 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 EIF3BP55884 814 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 CACNG1Q06432 222 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 CBLBQ13191 982 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 USP39Q53GS9 565 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 MRNIPQ6NTE8 343 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 SNX20Q7Z614 316 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 IQCKQ8N0W5 287 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 GPATCH11Q8N954 259 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 DTWD2Q8NBA8 298 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 PEX13Q92968 403 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 SPACA7Q96KW9 195 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 FAM167BQ9BTA0 163 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
PDLIM5-202ENST00000318007 PLXNA2O75051 1894 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 POM121BA6NF01 834 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 IQCF5A8MTL0 148 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 H7C0S8 307 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 RASGRF2O14827 1237 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 GPR37L1O60883 481 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 SLC25A14O95258 325 aaPredicted RBP15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 IGHV4-34P06331 123 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 GSTA2P09210 222 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 ITGB6P18564 788 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 STAT4Q14765 748 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 DBN1Q16643 649 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 PACS1Q6VY07 963 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 MARK2Q7KZI7 788 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 HEATR4Q86WZ0 1026 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 HSPA12BQ96MM6 686 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 CCDC77Q9BR77 488 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 CAAP1Q9H8G2 361 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 C11orf16Q9NQ32 467 aa15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 TSR3Q9UJK0 312 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 ZNF106Q9H2Y7 1883 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-202ENST00000318007 NDUFS3O75489 264 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 ACRV1P26436 265 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 AVPR2P30518 371 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 FMO4P31512 558 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 IGFALSP35858 605 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 GMPRP36959 345 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 ITGA9Q13797 1035 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 GPRC6AQ5T6X5 926 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 NAPRTQ6XQN6 538 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 SDCCAG8Q86SQ7 713 aaPredicted RBP15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 CYP4X1Q8N118 509 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 TP53I13Q8NBR0 393 aaPredicted RBP15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 C2CD4AQ8NCU7 369 aaPredicted RBP15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 DCAKDQ8WVC6 231 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 ZSCAN5AQ9BUG6 496 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 C1QTNF2Q9BXJ5 285 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 EIF2B4Q9UI10 523 aaKnown RBP15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 RIMKLBQ9ULI2 386 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 TMEM98Q9Y2Y6 226 aa15.27■□□□□ 0.04
PDLIM5-202ENST00000318007 PRKAB1Q9Y478 270 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms