RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HDAC2Q92769 488 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MS4A4AQ96JQ5 239 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 QKIQ96PU8 341 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DPY30Q9C005 99 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 RPF2Q9H7B2 306 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 PRDM5Q9NQX1 630 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ZDHHC7Q9NXF8 308 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 RNF186Q9NXI6 227 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF221Q9UK13 617 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ITGB1BP2Q9UKP3 347 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ADAM28Q9UKQ2 775 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ECM29Q5VYK3 1845 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 NAV1Q8NEY1 1877 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 EVPLLA8MZ36 301 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 GCATO75600 419 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SOAT2O75908 522 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 L1CAMP32004 1257 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ACADSBP45954 432 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 GSK3BP49841 420 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 NUDT6P53370 316 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DIO3P55073 304 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CYP4F8P98187 520 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MED22Q15528 200 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DDR2Q16832 855 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DGKKQ5KSL6 1271 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CELF3Q5SZQ8 465 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SPOUT1Q5T280 376 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 KLHL17Q6TDP4 642 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ERMP1Q7Z2K6 904 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DSG4Q86SJ6 1040 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SLC22A9Q8IVM8 553 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 B3GALNT2Q8NCR0 500 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 OR9Q1Q8NGQ5 310 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 OR10A6Q8NH74 314 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MZB1Q8WU39 189 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 FBXL18Q96ME1 805 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 GFM1Q96RP9 751 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MYOCQ99972 504 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 HAPLN2Q9GZV7 340 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 AKTIPQ9H8T0 292 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CYP3A43Q9HB55 503 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MAGEE1Q9HCI5 957 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TBC1D14Q9P2M4 693 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 MALT1Q9UDY8 824 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 PGAP2Q9UHJ9 254 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TRMT6Q9UJA5 497 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ANKRD6Q9Y2G4 727 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 A0A1W2PQ67 120 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 LOC110117498-PIK3R3F6TDL0 507 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 hCG_2039718K7EN88 272 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 PPEF2O14830 753 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SEC22BO75396 215 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 GLP2RO95838 553 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 UGT2B4P06133 528 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SLC10A3P09131 477 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 VARSP26640 1264 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SLC1A2P43004 574 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 SERPINH1P50454 418 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ZC3H12BQ5HYM0 836 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 FBXO47Q5MNV8 452 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 DENND5AQ6IQ26 1287 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CLYBLQ8N0X4 340 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CPSF7Q8N684 471 aaKnown RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 OLIG1Q8TAK6 271 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 CLEC4DQ8WXI8 215 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TMBIM1Q969X1 311 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TBATAQ96M53 351 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF560Q96MR9 790 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TBCCD1Q9NVR7 557 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 WWOXQ9NZC7 414 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 KLQ9UEF7 1012 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 GNPTGQ9UJJ9 305 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 C3orf18Q9UK00 162 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 TMED5Q9Y3A6 229 aa7.5□□□□□ -1.21
CDHR3-201ENST00000317716 POLR3HQ9Y535 204 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-201ENST00000317716 EFCAB10A6NFE3 127 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 SDHDO14521 159 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 TSPAN9O75954 239 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 LMO2P25791 158 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 PTPN3P26045 913 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 OXTRP30559 389 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 SOX6P35712 828 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 CCT3P49368 545 aaKnown RBP7.49□□□□□ -1.21
CDHR3-201ENST00000317716 HARS2P49590 506 aaKnown RBP7.49□□□□□ -1.21
CDHR3-201ENST00000317716 CASP9P55211 416 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 TCEAL1Q15170 157 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 TJAP1Q5JTD0 557 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 CEP78Q5JTW2 689 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 PCID2Q5JVF3 399 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 MRNIPQ6NTE8 343 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 PRMT9Q6P2P2 845 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 PGM2L1Q6PCE3 622 aa7.49□□□□□ -1.21
CDHR3-201ENST00000317716 METTL23Q86XA0 190 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms