RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MATN1P21941 496 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SLC1A2P43004 574 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ERVK-8P63133 956 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TIGD2Q4W5G0 525 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ATP6AP1LQ52LC2 224 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RSBN1Q5VWQ0 802 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EFCAB12Q6NXP0 572 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EID3Q8N140 333 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PYROXD2Q8N2H3 581 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM199Q8N511 208 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 APPL2Q8NEU8 664 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OR5K1Q8NHB7 308 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TWIST2Q8WVJ9 160 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 IL1RL2Q9HB29 575 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 FBRSL1Q9HCM7 1045 aaKnown RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CYP4F12Q9HCS2 524 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TREX1Q9NSU2 369 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PGAP2Q9UHJ9 254 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GRIP1Q9Y3R0 1128 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 HES2Q9Y543 173 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GSTA4O15217 222 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ITGBL1O95965 494 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 IL1RNP18510 177 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 HDCP19113 662 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF404Q494X3 552 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF678Q5SXM1 525 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 C12orf29Q8N999 325 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OR2T12Q8NG77 320 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TMBIM1Q969X1 311 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RIMKLBQ9ULI2 386 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 WNK3Q9BYP7 1800 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ATP6AP2A0A1C7CYW4 349 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TCRBV5S2A0A599 114 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ATP6AP2O75787 350 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NDST3O95803 873 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CLIC3O95833 236 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 AVPR1AP37288 418 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 EIF2DP41214 584 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CCNA1P78396 465 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM214Q6NUQ4 689 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RANBP10Q6VN20 620 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CATSPERGQ6ZRH7 1159 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 BNIPLQ7Z465 357 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PAF1Q8N7H5 531 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 IPMKQ8NFU5 416 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC2A14Q8TDB8 520 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 LRRN4Q8WUT4 740 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ZBED3Q96IU2 234 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FICDQ9BVA6 458 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CEP44Q9C0F1 390 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OSBPL2Q9H1P3 480 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 MFSD1Q9H3U5 465 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PCDHGA8Q9Y5G5 932 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CENPXA8MT69 81 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 KMOO15229 486 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 IDH3BO43837 385 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CDK14O94921 469 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 KRT6AP02538 564 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 KRT6BP04259 564 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 S100BP04271 92 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FUT4P22083 530 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SELENBP1Q13228 472 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 AHDC1Q5TGY3 1603 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 AGAP6Q5VW22 663 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SYCE2Q6PIF2 218 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PAGE2Q7Z2X7 111 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FAM126BQ8IXS8 530 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NIM1KQ8IY84 436 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TOP6BLQ8N6T0 577 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ARL10Q8N8L6 244 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GLB1L3Q8NCI6 653 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 AGAP4Q96P64 663 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GPR20Q99678 358 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC39A3Q9BRY0 314 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 COLEC11Q9BWP8 271 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DGCR6LQ9BY27 220 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GOLGA8CPA6NN73 597 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 C22orf31O95567 290 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DLGAP3O95886 979 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OGNP20774 298 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CHRNA5P30532 468 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CLCN3P51790 818 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PHC1P78364 1004 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TRAF3Q13114 568 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 AQP6Q13520 282 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 POU6F1Q14863 301 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SMAD1Q15797 465 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 UGT3A2Q3SY77 523 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 HECTD2Q5U5R9 776 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF544Q6NX49 715 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CEP97Q8IW35 865 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DENND6AQ8IWF6 608 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NKAPQ8N5F7 415 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ASCC1Q8N9N2 400 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OR56A4Q8NGH8 313 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DNAJB14Q8TBM8 379 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 BHMTQ93088 406 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 C18orf25Q96B23 403 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms