RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GDPD4Q6W3E5 623 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ZYG11AQ6WRX3 759 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 TAS1R1Q7RTX1 841 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 PPP3R2Q96LZ3 170 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ACAT2Q9BWD1 397 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 INTS10Q9NVR2 710 aaKnown RBP13.62□□□□□ -0.23
DDX54-202ENST00000314045 SLC12A4Q9UP95 1085 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 KCTD3Q9Y597 815 aa13.62□□□□□ -0.23
DDX54-202ENST00000314045 SHOX2O60902 331 aaPredicted RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 EPOP01588 193 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 LINC00032P0C843 101 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CHI3L1P36222 383 aaPredicted RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 MAPK9P45984 424 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 PKNOX1P55347 436 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 SLC25A3Q00325 362 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 UBAP2LQ14157 1087 aaKnown RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 TSNQ15631 228 aaKnown RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 XKR6Q5GH73 641 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 IRF7Q92985 503 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CXorf40BQ96DE9 158 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 OTUB1Q96FW1 271 aaPredicted RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 PSKH2Q96QS6 385 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CCDC134Q9H6E4 229 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 FKBP6O75344 327 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 AHSGP02765 367 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 NSG1P42857 185 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 NEK3P51956 506 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 HK2P52789 917 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 DSC1Q08554 894 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 XKR4Q5GH76 650 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 PHYKPLQ8IUZ5 450 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 KCNN1Q92952 543 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 TBC1D10AQ9BXI6 508 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CSNK1G1Q9HCP0 422 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 SNX5Q9Y5X3 404 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 NDUFS2O75306 463 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 PRKCHP24723 683 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 FOXN2P32314 431 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 SEC13P55735 322 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 ZNF598Q86UK7 904 aaKnown RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 RELL1Q8IUW5 271 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
DDX54-202ENST00000314045 UBE2E3Q969T4 207 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
DDX54-202ENST00000314045 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 H0YGN5 161 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 STK16O75716 305 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 ABCB1P08183 1280 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 SNRPB2P08579 225 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 COX4I1P13073 169 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 CDH2P19022 906 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 ADAM17P78536 824 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 CENPLQ8N0S6 344 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 AHI1Q8N157 1196 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 TRMT61BQ9BVS5 477 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 NMUR2Q9GZQ4 415 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 CAPN10Q9HC96 672 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 WARS2Q9UGM6 360 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 MYO18AQ92614 2054 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 MAFKO60675 156 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 RPIAP49247 311 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 DMC1Q14565 340 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 SAMD11Q96NU1 681 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 FEM1AQ9BSK4 669 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 KIFC1Q9BW19 673 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 TEX12Q9BXU0 123 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 MIR1-1HGQ9H1L0 117 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 C2orf71A6NGG8 1288 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 KELP23276 732 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PEX19P40855 299 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 GPR33Q49SQ1 333 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PITRM1Q5JRX3 1037 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 WASHC2DQ5SRD0 308 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 SNX20Q7Z614 316 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 MYCBPQ99417 103 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 KCTD14Q9BQ13 255 aaPredicted RBP13.6□□□□□ -0.23
DDX54-202ENST00000314045 ADAMTSL1Q8N6G6 1762 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX54-202ENST00000314045 ITPKAP23677 461 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 CXCR2P25025 360 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 ARHGAP8P85298 464 aa13.6□□□□□ -0.23
DDX54-202ENST00000314045 PRKG2Q13237 762 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms