RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 DHRS4L1P0CG22 281 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 IL9P15248 144 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 ZNF7P17097 686 aaPredicted RBP22.39■■□□□ 1.18
IRF3-201ENST00000309877 ETV3P41162 512 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 ITGA9Q13797 1035 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 ACOX1Q15067 660 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 CST6Q15828 149 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 SLC44A4Q53GD3 710 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 Q6ZVL8 140 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 TBC1D1Q86TI0 1168 aaPredicted RBP22.39■■□□□ 1.18
IRF3-201ENST00000309877 PLD6Q8N2A8 252 aaKnown RBP22.39■■□□□ 1.18
IRF3-201ENST00000309877 FAM3CQ92520 227 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 RAB7BQ96AH8 199 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 WRAP53Q9BUR4 548 aaKnown RBP22.39■■□□□ 1.18
IRF3-201ENST00000309877 SPATA16Q9BXB7 569 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 CDH19Q9H159 772 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 GPAMQ9HCL2 828 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 SLC2A4RGQ9NR83 387 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 ZNF358Q9NW07 568 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 TMEM216Q9P0N5 145 aa22.39■■□□□ 1.18
IRF3-201ENST00000309877 RUVBL2Q9Y230 463 aaKnown RBP22.39■■□□□ 1.18
IRF3-201ENST00000309877 H0Y858 1186 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 PSMD11O00231 422 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 AREL1O15033 823 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 RHOBTB1O94844 696 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 COL4A2P08572 1712 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 NEFHP12036 1026 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 PKMP14618 531 aaKnown RBP22.39■■□□□ 1.17
IRF3-201ENST00000309877 FDXRP22570 491 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 ACRV1P26436 265 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 P2RY2P41231 377 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 SERPINB4P48594 390 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 LIG3P49916 1009 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 SEC24CP53992 1094 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 IRX4P78413 519 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 MRPS21P82921 87 aaKnown RBP22.39■■□□□ 1.17
IRF3-201ENST00000309877 CNTN1Q12860 1018 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 CCDC153Q494R4 210 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 ZNF776Q68DI1 518 aaPredicted RBP22.39■■□□□ 1.17
IRF3-201ENST00000309877 CCDC91Q7Z6B0 441 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 CACUL1Q86Y37 369 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 TXNDC5Q8NBS9 432 aaKnown RBP22.39■■□□□ 1.17
IRF3-201ENST00000309877 OR2T3Q8NH03 318 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 ULK4Q96C45 1275 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 CHMP6Q96FZ7 201 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 COMMD10Q9Y6G5 202 aa22.39■■□□□ 1.17
IRF3-201ENST00000309877 SPTBN5Q9NRC6 3674 aaKnown RBP22.38■■□□□ 1.17
IRF3-201ENST00000309877 BPTFQ12830 3046 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 PRMT5O14744 637 aaPredicted RBP22.38■■□□□ 1.17
IRF3-201ENST00000309877 MID1O15344 667 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 PLIN3O60664 434 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 HOXB2P14652 356 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 C5AR1P21730 350 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 ADARP55265 1226 aaKnown RBP22.38■■□□□ 1.17
IRF3-201ENST00000309877 DCDC1P59894 354 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 PDK4Q16654 411 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 RBFAQ8N0V3 343 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 NXPE1Q8N323 547 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 LRRC8CQ8TDW0 803 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 KCTD4Q8WVF5 259 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 BIRC8Q96P09 236 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 C1QTNF1Q9BXJ1 281 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 CLPBQ9H078 707 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 FBRSQ9HAH7 460 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 TAS2R13Q9NYV9 303 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.38■■□□□ 1.17
IRF3-201ENST00000309877 EMCNQ9ULC0 261 aa22.38■■□□□ 1.17
IRF3-201ENST00000309877 LOC730098B7Z3J9 87 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 SPINT1O43278 529 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 DNAJC6O75061 913 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 ESR1P03372 595 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 VIMP08670 466 aaKnown RBP22.37■■□□□ 1.17
IRF3-201ENST00000309877 TFF2Q03403 129 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 CCDC15Q0P6D6 951 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 PDAP1Q13442 181 aaKnown RBP22.37■■□□□ 1.17
IRF3-201ENST00000309877 ZNF284Q2VY69 593 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 FBXO43Q4G163 708 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 ATP13A5Q4VNC0 1218 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 KIAA1211LQ6NV74 962 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 TECPR1Q7Z6L1 1165 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 NRSN1Q8IZ57 195 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 RABEP2Q9H5N1 569 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 NMRAL1Q9HBL8 299 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 POPDC3Q9HBV1 291 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 PCDHB1Q9Y5F3 818 aa22.37■■□□□ 1.17
IRF3-201ENST00000309877 AGAP14A8MT82 685 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 TCP11X1B4DZS4 312 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 WNT9AO14904 365 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 ADAM23O75077 832 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 KLHL2O95198 593 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 PROCP04070 461 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 CA5AP35218 305 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 FAM83EQ2M2I3 478 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 TSNAXIP1Q2TAA8 658 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 TMEM52BQ4KMG9 183 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 PIM3Q86V86 326 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 CENPLQ8N0S6 344 aaPredicted RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 CXorf40AQ8TE69 158 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 SCAMP4Q969E2 229 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 SCYL1Q96KG9 808 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms