RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FGF22Q9HCT0 170 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 MRPL40Q9NQ50 206 aaKnown RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 NLGN3Q9NZ94 848 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 VPS18Q9P253 973 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PCYOX1Q9UHG3 505 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PCOLCE2Q9UKZ9 415 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CSNK1G3Q9Y6M4 447 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DGKBQ9Y6T7 804 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PIKFYVEQ9Y2I7 2098 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SCAMP1O15126 338 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FANCGO15287 622 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 URI1O94763 535 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PRAMEF1O95521 474 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LDOC1O95751 146 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 IVLP07476 585 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CEACAM1P13688 526 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ITGALP20701 1170 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ADCY8P40145 1251 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GNPDA1P46926 289 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZNF140P52738 457 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SESN2P58004 480 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DAB2P98082 770 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DR1Q01658 176 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 C1orf61Q13536 156 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PEX6Q13608 980 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PTK6Q13882 451 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DHX34Q14147 1143 aaKnown RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TCEA2Q15560 299 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PPM1JQ5JR12 505 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 MARK2Q7KZI7 788 aaKnown RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SDR16C5Q8N3Y7 309 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR13C4Q8NGS5 318 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR4C6Q8NH72 309 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SLCO2A1Q92959 643 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GLMNQ92990 594 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 COX14Q96I36 57 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DNAJC1Q96KC8 554 aaKnown RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CNDP2Q96KP4 475 aaKnown RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TTC25Q96NG3 672 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CAMK1GQ96NX5 476 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR2M4Q96R27 311 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 C19orf43Q9BQ61 176 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TCEAL2Q9H3H9 227 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 RMI1Q9H9A7 625 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 IL26Q9NPH9 171 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CASS4Q9NQ75 786 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 UCKL1Q9NWZ5 548 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 BFARQ9NZS9 450 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 KLF15Q9UIH9 416 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FKBPLQ9UIM3 349 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CRLS1Q9UJA2 301 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SUFUQ9UMX1 484 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SLC17A4Q9Y2C5 497 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 BTBD3Q9Y2F9 522 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GPSM3Q9Y4H4 160 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SLC30A1Q9Y6M5 507 aa10.91□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ARID1BQ8NFD5 2236 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GPR89AB7ZAQ6 455 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TM4SF5O14894 197 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LDB2O43679 373 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 VEGFDO43915 354 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SRP72O76094 671 aaKnown RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 KCNK5O95279 499 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CEACAM5P06731 702 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GPR89BP0CG08 455 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ADRA1DP25100 572 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 AKT1P31749 480 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ILF3Q12906 894 aaKnown RBP eCLIP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 KCNJ11Q14654 390 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PTPRCAPQ14761 206 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TRIP6Q15654 476 aaKnown RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CHRNA6Q15825 494 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SKIDA1Q1XH10 827 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DEFB133Q30KQ1 61 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ATP13A5Q4VNC0 1218 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CCDC38Q502W7 563 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZRANB3Q5FWF4 1079 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LDLRAP1Q5SW96 308 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CERCAMQ5T4B2 595 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZCCHC8Q6NZY4 707 aaKnown RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LRRC8BQ6P9F7 803 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DBX2Q6ZNG2 339 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 NLRP9Q7RTR0 991 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 KANSL1Q7Z3B3 1105 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PPIL6Q8IXY8 311 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DTX3LQ8TDB6 740 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ULK4Q96C45 1275 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 RANBP9Q96S59 729 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GSDMCQ9BYG8 508 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 IL22Q9GZX6 179 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ASB8Q9H765 288 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TRIM39Q9HCM9 518 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 NLE1Q9NVX2 485 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SAMD15Q9P1V8 674 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PNMA8BQ9ULN7 279 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TMEM98Q9Y2Y6 226 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TCAF1Q9Y4C2 921 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms