RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 HNRNPH3P31942 346 aaKnown RBP20.34■□□□□ 0.85
RER1-201ENST00000306256 SPINT3P49223 89 aa20.34■□□□□ 0.85
RER1-201ENST00000306256 ARSDP51689 593 aa20.34■□□□□ 0.85
RER1-201ENST00000306256 RPL26P61254 145 aaKnown RBP20.34■□□□□ 0.85
RER1-201ENST00000306256 ZBTB17Q13105 803 aa20.34■□□□□ 0.85
RER1-201ENST00000306256 LRP8Q14114 963 aa20.34■□□□□ 0.85
RER1-201ENST00000306256 LYSMD1Q96S90 227 aa20.34■□□□□ 0.85
RER1-201ENST00000306256 RPL26L1Q9UNX3 145 aaKnown RBP20.34■□□□□ 0.85
RER1-201ENST00000306256 TLN1Q9Y490 2541 aaKnown RBP20.34■□□□□ 0.85
RER1-201ENST00000306256 LRRD1A4D1F6 860 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 CD82P27701 267 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 FASLGP48023 281 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 CYP4F2P78329 520 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 TRA2AQ13595 282 aaKnown RBP eCLIP20.33■□□□□ 0.85
RER1-201ENST00000306256 GALNT3Q14435 633 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 MESDQ14696 234 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 SLC18A3Q16572 532 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 HENMT1Q5T8I9 393 aaKnown RBP20.33■□□□□ 0.85
RER1-201ENST00000306256 CHST15Q7LFX5 561 aaPredicted RBP20.33■□□□□ 0.85
RER1-201ENST00000306256 SFRP1Q8N474 314 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 PLD5Q8N7P1 536 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 AGBL5Q8NDL9 886 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 ART4Q93070 314 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 ZNF830Q96NB3 372 aaPredicted RBP20.33■□□□□ 0.85
RER1-201ENST00000306256 RNF157Q96PX1 679 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 TAAR9Q96RI9 348 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 SLC38A3Q99624 504 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 CEP41Q9BYV8 373 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 PKD2L2Q9NZM6 624 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 VPS18Q9P253 973 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 KCNK6Q9Y257 313 aa20.33■□□□□ 0.85
RER1-201ENST00000306256 SETXQ7Z333 2677 aaKnown RBP20.32■□□□□ 0.84
RER1-201ENST00000306256 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.32■□□□□ 0.84
RER1-201ENST00000306256 ACP5P13686 325 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 CSTF2P33240 577 aaKnown RBP eCLIP20.32■□□□□ 0.84
RER1-201ENST00000306256 MAN1A1P33908 653 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 PPIDQ08752 370 aaKnown RBP20.32■□□□□ 0.84
RER1-201ENST00000306256 SQSTM1Q13501 440 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 LYSMD3Q7Z3D4 306 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 CNTD1Q8N815 330 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 AHCYL2Q96HN2 611 aaKnown RBP20.32■□□□□ 0.84
RER1-201ENST00000306256 ARHGAP9Q9BRR9 750 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 MLPHQ9BV36 600 aaPredicted RBP20.32■□□□□ 0.84
RER1-201ENST00000306256 B3GNT4Q9C0J1 378 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 BRD8Q9H0E9 1235 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 FAM83DQ9H4H8 585 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 ARFGAP3Q9NP61 516 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 OCIAD1Q9NX40 245 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 TBC1D29Q9UFV1 150 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 HEY1Q9Y5J3 304 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■□□□□ 10.9
RER1-201ENST00000306256 B3GALT1Q9Y5Z6 326 aa20.32■□□□□ 0.84
RER1-201ENST00000306256 ZNF106Q9H2Y7 1883 aaKnown RBP20.31■□□□□ 0.84
RER1-201ENST00000306256 ANKRD66B4E2M5 251 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 STMND1H3BQB6 276 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 SLC28A2O43868 658 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 SLC4A1P02730 911 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 GPLD1P80108 840 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 IFI35P80217 286 aaPredicted RBP20.31■□□□□ 0.84
RER1-201ENST00000306256 HHEXQ03014 270 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 NFATC3Q12968 1075 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 NFATC2Q13469 925 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 ASTE1Q2TB18 679 aaPredicted RBP20.31■□□□□ 0.84
RER1-201ENST00000306256 SNAP47Q5SQN1 464 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.31■□□□□ 0.84
RER1-201ENST00000306256 ZNF648Q5T619 568 aaPredicted RBP20.31■□□□□ 0.84
RER1-201ENST00000306256 ALS2CLQ60I27 953 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 TMEM71Q6P5X7 295 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 FAM129CQ86XR2 697 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 ZSCAN1Q8NBB4 408 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 OR10G6Q8NH81 332 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 CCHCR1Q8TD31 782 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 HTR3CQ8WXA8 447 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 DEF6Q9H4E7 631 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 SLC39A1Q9NY26 324 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 PCDHGA3Q9Y5H0 932 aa20.31■□□□□ 0.84
RER1-201ENST00000306256 TENM4Q6N022 2769 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 MYO18BQ8IUG5 2567 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 EFCAB7A8K855 629 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 A8MU76 341 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 DUX1O43812 170 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 SNX2O60749 519 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 ITGB2P05107 769 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 TMEM253P0C7T8 217 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 FAM87AP0C7U9 286 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 PIRTP0C851 137 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 AP1B1Q10567 949 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 NPNTQ6UXI9 565 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 KDELC2Q7Z4H8 507 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 RAVER1Q8IY67 606 aaKnown RBP20.3■□□□□ 0.84
RER1-201ENST00000306256 CCDC112Q8NEF3 446 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.3■□□□□ 0.84
RER1-201ENST00000306256 NKD1Q969G9 470 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 EID2BQ96D98 161 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 DPYSL5Q9BPU6 564 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 ADGRE3Q9BY15 652 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 LCMT1Q9UIC8 334 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 SHOC2Q9UQ13 582 aa20.3■□□□□ 0.84
RER1-201ENST00000306256 C3orf70A6NLC5 250 aaPredicted RBP20.29■□□□□ 0.84
RER1-201ENST00000306256 AKR1B10O60218 316 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms