RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KCTD4Q8WVF5 259 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 MFSD3Q96ES6 412 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LRRC46Q96FV0 321 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM59LQ9UK28 342 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 STON1Q9Y6Q2 735 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ANKRD66B4E2M5 251 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TCF4P15884 667 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 CD72P21854 359 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ALAS2P22557 587 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ATP5F1P24539 256 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SOX11P35716 441 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 PAFAH1B3Q15102 231 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 KIAA0319Q5VV43 1072 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 KLHDC10Q6PID8 442 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LRRTM4Q86VH4 590 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 CPT1BQ92523 772 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 KIAA1143Q96AT1 154 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 RAD51AP1Q96B01 352 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 PWWP2AQ96N64 755 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 STRADBQ9C0K7 418 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SLCO3A1Q9UIG8 710 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 HEMK1Q9Y5R4 338 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 NUMBLQ9Y6R0 609 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TCRBV9S1A1TA0A576 114 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 ALOX15BO15296 676 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 OR10H2O60403 315 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 PAK4O96013 591 aaPredicted RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 ESR1P03372 595 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 RPL26P61254 145 aaKnown RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 NAA20P61599 178 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 GALNT2Q10471 571 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 ATAD3BQ5T9A4 648 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM173Q86WV6 379 aaPredicted RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 SYT12Q8IV01 421 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TERB1Q8NA31 727 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 GPR21Q99679 349 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 HEBP1Q9NRV9 189 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 RPL26L1Q9UNX3 145 aaKnown RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 SLC12A4Q9UP95 1085 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 ARL5AQ9Y689 179 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TMX2-CTNND1H3BSU7 103 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 SLC7A4O43246 635 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 FAM153BP0C7A2 387 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 NDUFS1P28331 727 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 PPP2R1BP30154 601 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 NTSP30990 170 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 SLC25A11Q02978 314 aaKnown RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 FAM153CQ494X1 144 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 COL13A1Q5TAT6 717 aaPredicted RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 HECTD2Q5U5R9 776 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 EMC10Q5UCC4 262 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 PACS1Q6VY07 963 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 KIAA0408Q6ZU52 694 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM139Q8IV31 216 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 FIBINQ8TAL6 211 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 FAM162AQ96A26 154 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 MRPL57Q9BQC6 102 aaKnown RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 ACSS3Q9H6R3 686 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 EIF2B3Q9NR50 452 aaKnown RBP9.21□□□□□ -0.93
PTPRE-202ENST00000306042 KLC4Q9NSK0 619 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 SOX13Q9UN79 622 aa9.21□□□□□ -0.93
PTPRE-202ENST00000306042 TTC34A8MYJ7 566 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 TSPAN6O43657 245 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ULK1O75385 1050 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 CLDN7O95471 211 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 IL10P22301 178 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ADAM17P78536 824 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF33AQ06730 810 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ASTE1Q2TB18 679 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 INO80DQ53TQ3 878 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 FAM78AQ5JUQ0 283 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 PM20D1Q6GTS8 502 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 RALGPS2Q86X27 583 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 CAMKK1Q8N5S9 505 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 EIF1ADQ8N9N8 165 aaKnown RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 TNIP2Q8NFZ5 429 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 LMLNQ96KR4 655 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 B4GALT6Q9UBX8 382 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UBDO15205 165 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A9O60656 530 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 CYP7B1O75881 506 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 GSRP00390 522 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ABCB1P08183 1280 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A6P19224 532 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A1P22309 533 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A4P22310 534 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A3P35503 534 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A5P35504 534 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 HPCAL1P37235 193 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 CST6Q15828 149 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 LPAL2Q16609 132 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms