RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF569Q5MCW4 686 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 PDPK2PQ6A1A2 396 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 C17orf82Q86X59 251 aaPredicted RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 CDKL3Q8IVW4 592 aaPredicted RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 SFTPA2Q8IWL1 248 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 UBL4BQ8N7F7 174 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 Q8N9G6 341 aaPredicted RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ACTL9Q8TC94 416 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ZNF578Q96N58 590 aaPredicted RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 DCBLD2Q96PD2 775 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 DESI2Q9BSY9 194 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 TRABDQ9H4I3 376 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ZNHIT2Q9UHR6 403 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 SATB2Q9UPW6 733 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ASXL3Q9C0F0 2248 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 COL27A1Q8IZC6 1860 aaPredicted RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 MIF4GDA9UHW6 222 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 D6RAR5 112 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 TLX3O43711 291 aaPredicted RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ZNF189O75820 626 aaPredicted RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ATP1A1P05023 1023 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 RBL1P28749 1068 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 EIF2S3P41091 472 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 BIRC2Q13490 618 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 C3orf38Q5JPI3 329 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ALS2CLQ60I27 953 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ITPRIPL1Q6GPH6 555 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 SPRED1Q7Z699 444 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 TRAM1L1Q8N609 369 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 GPR26Q8NDV2 337 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 HNRNPLLQ8WVV9 542 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ALG3Q92685 438 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 LHX6Q9UPM6 363 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 ST14Q9Y5Y6 855 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 OAS3Q9Y6K5 1087 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 PKD1L2Q7Z442 2459 aa26.22■■□□□ 1.79
CDKN2A-201ENST00000304494 A0A1W2PQM1 296 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 RHPN2P1A8MT19 583 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 CASC3O15234 703 aaKnown RBP26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 STK10O94804 968 aaKnown RBP26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 ECEL1O95672 775 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 PYGMP11217 842 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 PDX1P52945 283 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 MAZP56270 477 aaKnown RBP26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 EIF3EP60228 445 aaKnown RBP26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 C19orf48Q6RUI8 117 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 IGF2-ASQ6U949 168 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 LRRC69Q6ZNQ3 347 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 OXNAD1Q96HP4 312 aaPredicted RBP26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 MRGPRX2Q96LB1 330 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 TMEM74Q96NL1 305 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 HERPUD2Q9BSE4 406 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 FSD1LQ9BXM9 530 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 HACD3Q9P035 362 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 PCDHGA8Q9Y5G5 932 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 SPO11Q9Y5K1 396 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 APC2O95996 2303 aa26.21■■□□□ 1.79
CDKN2A-201ENST00000304494 DSPP15924 2871 aaKnown RBP26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 CCDC187A0A096LP49 1063 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 DNAJC6O75061 913 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 ANXA9O76027 345 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 PTMAP06454 111 aaKnown RBP26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 HLA-DPA1P20036 260 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 GSDMDP57764 484 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 ERVPABLB-1P60509 514 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 SIRPB2Q5JXA9 342 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 ARL14Q8N4G2 192 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 IPMKQ8NFU5 416 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 WDR36Q8NI36 951 aaKnown RBP26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 LIN37Q96GY3 246 aaPredicted RBP26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 PLEKHG4BQ96PX9 1271 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 STRADBQ9C0K7 418 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 GBA3Q9H227 469 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 CARD9Q9H257 536 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 THSD1Q9NS62 852 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 TRIM10Q9UDY6 481 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 PLEKHM1Q9Y4G2 1056 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 RP1P56715 2156 aa26.2■■□□□ 1.78
CDKN2A-201ENST00000304494 ACACAQ13085 2346 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 GPR89AB7ZAQ6 455 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 F5H423 210 aaPredicted RBP26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 SLC25A14O95258 325 aaPredicted RBP26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 GPR89BP0CG08 455 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 RBP3P10745 1247 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 BPIP17213 487 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 RBMS1P29558 406 aaKnown RBP26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 HMGCLP35914 325 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 GEMP55040 296 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 INHBCP55103 352 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 SLC1A5Q15758 541 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 COL28A1Q2UY09 1125 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 ZDHHC20Q5W0Z9 365 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 DARS2Q6PI48 645 aaKnown RBP26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 CHST15Q7LFX5 561 aaPredicted RBP26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 ZNF438Q7Z4V0 828 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 PHYKPLQ8IUZ5 450 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 NAGSQ8N159 534 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 SLC25A41Q8N5S1 370 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 GLYATL1Q969I3 302 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 C10orf88Q9H8K7 445 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms