RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZSCAN5CA6NGD5 496 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 PRLP01236 227 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 PGRP06401 933 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ELFN1P0C7U0 828 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 UROSP10746 265 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 NRG1Q02297 640 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 CCNYL2Q5T2Q4 361 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 FAM92BQ6ZTR7 304 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 KCTD8Q6ZWB6 473 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 SPAG16Q8N0X2 631 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 OR2AJ1Q8NGZ0 328 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ERMAPQ96PL5 475 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 COPS8Q99627 209 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ZSCAN5AQ9BUG6 496 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 CHIAQ9BZP6 476 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 CCDC86Q9H6F5 360 aaKnown RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 FAM86B1E9PN63 330 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 HDAC3O15379 428 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 NRP2O60462 931 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 RGS8P57771 180 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 SLC5A9Q2M3M2 681 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 TTMPQ5BVD1 217 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 CAPN13Q6MZZ7 669 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 AAGABQ6PD74 315 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 FBXO33Q7Z6M2 555 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 SATL1Q86VE3 508 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 TDRPQ86YL5 185 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 DNERQ8NFT8 737 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 OR8D1Q8WZ84 308 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 SENP8Q96LD8 212 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ZSWIM3Q96MP5 696 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF558Q96NG5 402 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 HCN3Q9P1Z3 774 aa10.35□□□□□ -0.75
CLIP1-201ENST00000302528 FBXO9Q9UK97 447 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-201ENST00000302528 GPR75-ASB3A0A0A6YYF3 556 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 HYKKA2RU49 373 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TRUB2O95900 331 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 CCNE2O96020 404 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ZSCAN5DPP0CG00 497 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 AKR1A1P14550 325 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ETS2P15036 469 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 LPOP22079 712 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 EIF4BP23588 611 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 GCNT1Q02742 428 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 CREMQ03060 361 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 CARTPTQ16568 116 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 SLC9B1Q4ZJI4 515 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 MTX3Q5HYI7 312 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 UBE2R2Q712K3 238 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF410Q86VK4 478 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 HJURPQ8NCD3 748 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 REPS2Q8NFH8 660 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 LRRC20Q8TCA0 184 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TRNAU1APQ9NX07 287 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 MED11Q9P086 117 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 GMIPQ9P107 970 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TIMM8BQ9Y5J9 83 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 NR2E3Q9Y5X4 410 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 GJB6O95452 261 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 GSTT2BP0CG30 244 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 HNRNPLP14866 589 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DEFA5Q01523 94 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TIGD2Q4W5G0 525 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 LIPMQ5VYY2 423 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 SLC9A4Q6AI14 798 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 FAM47BQ8NA70 645 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ZMIZ2Q8NF64 920 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 AGAP11Q8TF27 550 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ADAM2Q99965 735 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 KIF20BQ96Q89 1820 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 KDM4BO94953 1096 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 CD2P06729 351 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 NPR2P20594 1047 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 AZGP1P25311 298 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 EPHA3P29320 983 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 AP2S1P53680 142 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 IST1P53990 364 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PLA2G4EQ3MJ16 856 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 FAM153CQ494X1 144 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 NPNTQ6UXI9 565 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 RAVER1Q8IY67 606 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TBC1D21Q8IYX1 336 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 SPATA6LQ8N4H0 392 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 RDH11Q8TC12 318 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 BRSK1Q8TDC3 778 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TMEM68Q96MH6 324 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 KXD1Q9BQD3 176 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 RC3H2Q9HBD1 1191 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms