RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 VPS26BQ4G0F5 336 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FNDC3BQ53EP0 1204 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF697Q5TEC3 545 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ADNP2Q6IQ32 1131 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PAMR1Q6UXH9 720 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FRMD7Q6ZUT3 714 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ECHDC2Q86YB7 292 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KCTD4Q8WVF5 259 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 DNAJC1Q96KC8 554 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PIH1D1Q9NWS0 290 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SEC14L4Q9UDX3 406 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 AKAP8O43823 692 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLC28A2O43868 658 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 AIREO43918 545 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 OR10H2O60403 315 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PEX11AO75192 247 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 RLN1P04808 185 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 RORCP51449 518 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TRIM32Q13049 653 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KLF10Q13118 480 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 NOMO1Q15155 1222 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CNPY1Q3B7I2 92 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KLHL22Q53GT1 634 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 INTS6LQ5JSJ4 861 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TAPT1Q6NXT6 567 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C15orf52Q6ZUT6 534 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SPAG16Q8N0X2 631 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 HTRA1Q92743 480 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 LRTM1Q9HBL6 345 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PDP1Q9P0J1 537 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLC17A7Q9P2U7 560 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 DPPA5A6NC42 116 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KCNQ2O43526 872 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 LYPLA2O95372 231 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 AP2A1O95782 977 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TUBA1BP68363 451 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MRPS5P82675 430 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 E2F2Q14209 437 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 EIPR1Q53HC9 387 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TUBA1AQ71U36 451 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ADAM32Q8TC27 787 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CCDC107Q8WV48 283 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 AHCYL2Q96HN2 611 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C12orf66Q96MD2 445 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLCO1B3Q9NPD5 702 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ADARB2Q9NS39 739 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CALML5Q9NZT1 146 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MRPS33Q9Y291 106 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TELO2Q9Y4R8 837 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 IFNW1P05000 195 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 IFNA6P05013 189 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ZSCAN5DPP0CG00 497 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 GOT1P17174 413 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MNDAP41218 407 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CACNG1Q06432 222 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C15orf59Q2T9L4 293 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 RANBP3LQ86VV4 465 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 HAS1Q92839 578 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MTFMTQ96DP5 389 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLC22A4Q9H015 551 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PCDH12Q9NPG4 1184 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 A0A1W2PQ67 120 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CAPN8A6NHC0 703 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FAM25EA8MYX2 175 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 M0QX08 132 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FFAR3O14843 346 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 GPR42O15529 346 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 AMHP03971 560 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CCNHP51946 323 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CAPN13Q6MZZ7 669 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CERS6Q6ZMG9 384 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 APTXQ7Z2E3 356 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FBXO5Q9UKT4 447 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C5orf60A6NFR6 353 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PRODHO43272 600 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MAFO75444 373 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CBX3Q13185 183 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 AP5B1Q2VPB7 878 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF730Q6ZMV8 503 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 QSOX2Q6ZRP7 698 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PIGWQ7Z7B1 504 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 DAW1Q8N136 415 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 BEND7Q8N7W2 519 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LRRC57Q8N9N7 239 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 FAM98AQ8NCA5 519 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 SENP8Q96LD8 212 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 MYCP01106 439 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 BMP6P22004 513 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PTGS2P35354 604 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 LSM3P62310 102 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 ECT2LQ008S8 904 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TIGD2Q4W5G0 525 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 CELF3Q5SZQ8 465 aaKnown RBP7.6□□□□□ -1.19
SF3B3-201ENST00000302516 C11orf65Q8NCR3 313 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 PIGXQ8TBF5 258 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 TWIST2Q8WVJ9 160 aa7.6□□□□□ -1.19
SF3B3-201ENST00000302516 KBTBD7Q8WVZ9 684 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms