RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 APPL1Q9UKG1 709 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 SLC8A2Q9UPR5 921 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 MED16Q9Y2X0 877 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 GPR39O43194 453 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 UNC5CO95185 931 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ASLP04424 464 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ARSAP15289 507 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 CD1DP15813 335 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ALOX15P16050 662 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ADARP55265 1226 aaKnown RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 CRTC1Q6UUV9 634 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 GDPD4Q6W3E5 623 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ISCA2Q86U28 154 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 TSPAN33Q86UF1 283 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 MCCC1Q96RQ3 725 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 ALG9Q9H6U8 611 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 FAM50BQ9Y247 325 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 SLC27A6Q9Y2P4 619 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 GAPDHSO14556 408 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 VPS26AO75436 327 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 PYGLP06737 847 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 BPIP17213 487 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ITGALP20701 1170 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CTSL3PQ5NE16 218 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 SNX20Q7Z614 316 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ALYREFQ86V81 257 aaKnown RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CBARPQ8N350 705 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 DRAXINQ8NBI3 349 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 GRIN3AQ8TCU5 1115 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ZFYVE19Q96K21 471 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 PLEKHG4BQ96PX9 1271 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 SH3GL3Q99963 347 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 HEPHQ9BQS7 1158 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CENPOQ9BU64 300 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ILKAPQ9H0C8 392 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CDH19Q9H159 772 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 EBF3Q9H4W6 596 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 DNAJC28Q9NX36 388 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 OBP2AQ9NY56 170 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 LMCD1Q9NZU5 365 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 OAS3Q9Y6K5 1087 aaKnown RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 NEMP2A6NFY4 417 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 HEPACAM2A8MVW5 462 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 A8MX80 341 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 TTC34A8MYJ7 566 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 F8W8V4 182 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ZBTB14O43829 449 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 NPHS1O60500 1241 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 TULP3O75386 442 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ATP5HO75947 161 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ESR1P03372 595 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CHRNGP07510 517 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 SRPRAP08240 638 aaKnown RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ZNF24P17028 368 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CD9P21926 228 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 PPARGP37231 505 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 SPAM1P38567 509 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 LRRC66Q68CR7 880 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 PIWIL4Q7Z3Z4 852 aaKnown RBP14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ETFBKMTQ8IXQ9 262 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 PTERQ96BW5 349 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 GPR21Q99679 349 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 EBF4Q9BQW3 602 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 IL26Q9NPH9 171 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 ACSS2Q9NR19 701 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 NCKIPSDQ9NZQ3 722 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 CDH22Q9UJ99 828 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 RAP2CQ9Y3L5 183 aa14.17□□□□□ -0.14
C9orf3-202ENST00000297979 GLYATL1P3A0A0U1RQE8 302 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 A8MT66 165 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 RFXAPO00287 272 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 FCHO1O14526 889 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TPPPO94811 219 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 IPO13O94829 963 aaKnown RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 NFATC2Q13469 925 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 SETMARQ53H47 684 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 ARL13AQ5H913 290 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 PAQR3Q6TCH7 311 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TRIM67Q6ZTA4 783 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 MAVSQ7Z434 540 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 SLC22A9Q8IVM8 553 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 CCNYL1Q8N7R7 359 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 PPM1EQ8WY54 764 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 MOCOSQ96EN8 888 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 RILPQ96NA2 401 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 KLHL32Q96NJ5 620 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TTC1Q99614 292 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 P2RY12Q9H244 342 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 ASB8Q9H765 288 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TRPV4Q9HBA0 871 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 SAR1AQ9NR31 198 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 KCNA5P22460 613 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 SERPINB5P36952 375 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms