RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 LYVE1Q9Y5Y7 322 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 POMT1Q9Y6A1 747 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CEP170BQ9Y4F5 1589 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 METP08581 1390 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 LINC00854A0A1B0GVQ3 168 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PRSS44E7EML9 344 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 COMTP21964 271 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PRELPP51888 382 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 DPY19L2Q6NUT2 758 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 GALNT7Q86SF2 657 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CLYBLQ8N0X4 340 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 NXPE2Q96DL1 559 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CRISPLD1Q9H336 500 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 AKR1B1P15121 316 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CYP2A7P20853 494 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 GEMP55040 296 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 RBP5P82980 135 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 SELPLGQ14242 412 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 RRP1BQ14684 758 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ANKDD1AQ495B1 522 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 STXBP5Q5T5C0 1151 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CHRDL2Q6WN34 429 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 KAT5Q92993 513 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF669Q96BR6 464 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FUNDC2Q9BWH2 189 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 LRRC19Q9H756 370 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PTGFRNQ9P2B2 879 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PRKAG3Q9UGI9 489 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 TET2Q6N021 2002 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 IFT172Q9UG01 1749 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 C20orf202A1L168 122 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 APOC4-APOC2K7ER74 178 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 LRRTM2O43300 516 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TOX4O94842 621 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RAB36O95755 333 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PAHP00439 452 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 APOC2P02655 101 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 EPB42P16452 691 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PTPN7P35236 360 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NUDT1P36639 197 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RPS9P46781 194 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 KCNJ2P63252 427 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF404Q494X3 552 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GALNTL6Q49A17 601 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ATF7IP2Q5U623 682 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 KLHDC10Q6PID8 442 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SAPCD2Q86UD0 394 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SMG7Q92540 1137 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CCDC167Q9P0B6 97 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 AKAP3O75969 853 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 E2F1Q01094 437 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CREG2Q8IUH2 290 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 FBXO39Q8N4B4 442 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MAPK15Q8TD08 544 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 BRSK1Q8TDC3 778 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZSWIM5Q9P217 1185 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PZPP20742 1482 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 TESPA1A2RU30 521 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SMLR1H3BR10 107 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CABYRO75952 493 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ALDH1A1P00352 501 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 HDCP19113 662 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 S100A7P31151 101 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 S100A3P33764 101 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ABCG1P45844 678 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GPR1P46091 355 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GPC3P51654 580 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 VSX2P58304 361 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 MTMR2Q13614 643 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 BCL2A1Q16548 175 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CTC1Q2NKJ3 1217 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ALG10Q5BKT4 473 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GLRA4Q5JXX5 417 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 SPOUT1Q5T280 376 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF410Q86VK4 478 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 C11orf70Q9BRQ4 267 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 GPR63Q9BZJ6 419 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CTPS2Q9NRF8 586 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 FAIMQ9NVQ4 179 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 NPHP3-ACAD11A0A0J9YXS1 232 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF185O15231 689 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CST1P01037 141 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 RPL6Q02878 288 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CAMK2GQ13555 558 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 PTCHD3Q3KNS1 767 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 UGT3A2Q3SY77 523 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ANGEL2Q5VTE6 544 aaKnown RBP4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CDKAL1Q5VV42 579 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
CSMD3-201ENST00000297405 CIR1Q86X95 450 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms