RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 CLCQ05315 142 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 VAC14Q08AM6 782 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 C18orf21Q32NC0 220 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 UNC50Q53HI1 259 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 KCTD11Q693B1 232 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 ANKRD34AQ69YU3 496 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 ZNF598Q86UK7 904 aaKnown RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 FUNDC1Q8IVP5 155 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 CMTM6Q9NX76 183 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 TLR5O60602 858 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 MAFKO60675 156 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 LRATO95237 230 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 OR4D1Q15615 310 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 LRRTM3Q86VH5 581 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 TOP6BLQ8N6T0 577 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 TEX37Q96LM6 180 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 FAM193BQ96PV7 902 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 SPC25Q9HBM1 224 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 GMEB1Q9Y692 573 aa13.25□□□□□ -0.29
TNFRSF21-201ENST00000296861 M0R3G1 203 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 AP3B1O00203 1094 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 GPR32O75388 356 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 DIRAS1O95057 198 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 FPGSQ05932 587 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CROCCP3Q8IVE0 287 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CPSF7Q8N684 471 aaKnown RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 SMYD1Q8NB12 490 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 OR7D4Q8NG98 312 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 FCRL5Q96RD9 977 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 KLHL25Q9H0H3 589 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 SMPD4Q9NXE4 827 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 POLR3HQ9Y535 204 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 MYO7AQ13402 2215 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TMEM247A6NEH6 219 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 ARL5CA6NH57 179 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 COL6A2P12110 1019 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 PBX3P40426 434 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 ZNF678Q5SXM1 525 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TMEM207Q6UWW9 146 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TMEM151AQ8N4L1 468 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 SIDT2Q8NBJ9 832 aaKnown RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 C2CD4AQ8NCU7 369 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 HMGCLL1Q8TB92 370 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 AURKBQ96GD4 344 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CENPNQ96H22 339 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 GPR78Q96P69 363 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 ROGDIQ9GZN7 287 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 MIR1-1HGQ9H1L0 117 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 AMBNQ9NP70 447 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 PRDM8Q9NQV8 689 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 POLE4Q9NR33 117 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CATSPERZQ9NTU4 200 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 POLG2Q9UHN1 485 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TRMT6Q9UJA5 497 aaKnown RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 HS3ST4Q9Y661 456 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 PTPRFP10586 1907 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 LOXHD1Q8IVV2 1947 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 MICAL3Q7RTP6 2002 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 NT5C1B-RDH14C9J2C7 533 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CCNA2P20248 432 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 IMPDH1P20839 514 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 CCNCP24863 283 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 GDF5P43026 501 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 OR4D2P58180 307 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 RPL38P63173 70 aaKnown RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 MEP1AQ16819 746 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 SIRPB2Q5JXA9 342 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 UGT3A1Q6NUS8 523 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 ISCA2Q86U28 154 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TNIP2Q8NFZ5 429 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 OR10A6Q8NH74 314 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 RBM38Q9H0Z9 239 aaKnown RBP13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 GSTO2Q9H4Y5 243 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 RASSF1Q9NS23 344 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
TNFRSF21-201ENST00000296861 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 CFAP99D6REC4 459 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 OR1I1O60431 355 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 SLC22A3O75751 556 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 RAD51Q06609 339 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 ACAP2Q15057 778 aa13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 TIGD7Q6NT04 549 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF21-201ENST00000296861 GLT6D1Q7Z4J2 308 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms