RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 FAM149AA5PLN7 773 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 TRIM24O15164 1050 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 MAGEC1O60732 1142 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 UGT2B4P06133 528 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ATXN1LP0C7T5 689 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 ME2P23368 584 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PBLDP30039 288 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SLC7A2P52569 658 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 MED21Q13503 144 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 TCEA2Q15560 299 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 TECRLQ5HYJ1 363 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 LCA5Q86VQ0 697 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 FNDC5Q8NAU1 212 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CLHC1Q8NHS4 586 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 PRICKLE1Q96MT3 831 aaPredicted RBP9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SLC30A3Q99726 388 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 S100A14Q9HCY8 104 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 VPS51Q9UID3 782 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 CLEC4EQ9ULY5 219 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 SORCS3Q9UPU3 1222 aa9.26□□□□□ -0.93
PRDM9-201ENST00000296682 DPPA5A6NC42 116 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 KRT87PA6NCN2 255 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF195O14628 629 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 OR4F21O95013 312 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 VNN2O95498 520 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 PRAMEF1O95521 474 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 PEX11BO96011 259 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 PKMP14618 531 aaKnown RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 HOXD9P28356 352 aaPredicted RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 HMOX2P30519 316 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 DIO3P55073 304 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SH3BP2P78314 561 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 GRB7Q14451 532 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 GPNMBQ14956 572 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ACAP2Q15057 778 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 RETSATQ6NUM9 610 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 KBTBD2Q8IY47 623 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 C3orf30Q96M34 536 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SEPHS2Q99611 448 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 BOCQ9BWV1 1114 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 EBF3Q9H4W6 596 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 PIDD1Q9HB75 910 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ABCB8Q9NUT2 735 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SPG21Q9NZD8 308 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 VTI1BQ9UEU0 232 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SUN2Q9UH99 717 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF839A8K0R7 811 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 E7ENX8 843 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SDHDO14521 159 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 AZIN1O14977 448 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 H2AFYO75367 372 aaKnown RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 CYBBP04839 570 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 LEPRP48357 1165 aaKnown RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 HSPA7P48741 367 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MAPKAPK2P49137 400 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 STX5Q13190 355 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 NR6A1Q15406 480 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 IL27RAQ6UWB1 636 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SLC22A9Q8IVM8 553 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ELMOD1Q8N336 334 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MIER2Q8N344 545 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 FIBCD1Q8N539 461 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 GFM2Q969S9 779 aaKnown RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 CCDC126Q96EE4 140 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 C19orf60Q96EN9 201 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MFSD1Q9H3U5 465 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 AKTIPQ9H8T0 292 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 FNIP2Q9P278 1114 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SLCO3A1Q9UIG8 710 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 LRRC42Q9Y546 428 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SQORQ9Y6N5 450 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MIA3Q5JRA6 1907 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 RNF103-CHMP3A0A140T963 221 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MYOCOSA0A1B0GUC4 107 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SAC3D1A6NKF1 404 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SYNCRIPO60506 623 aaKnown RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ECI2O75521 394 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SLC25A14O95258 325 aaPredicted RBP9.25□□□□□ -0.93
PRDM9-201ENST00000296682 COL6A2P12110 1019 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 SYN1P17600 705 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 RAP1GDS1P52306 607 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 AQP4P55087 323 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 MS4A2Q01362 244 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 CLCQ05315 142 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 IMPG1Q17R60 797 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ANO7Q6IWH7 933 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 KIAA0408Q6ZU52 694 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 CNTN4Q8IWV2 1026 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 TWIST2Q8WVJ9 160 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 TADA1Q96BN2 335 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 PYCR2Q96C36 320 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 FEM1CQ96JP0 617 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 CNDP1Q96KN2 507 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms