RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 UQCRBP14927 111 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 ARMC8Q8IUR7 673 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
CDCP1-201ENST00000296129 NOL11Q9H8H0 719 aaKnown RBP17.16■□□□□ 0.34
CDCP1-201ENST00000296129 NUDT4Q9NZJ9 180 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 C3orf18Q9UK00 162 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 MED26O95402 600 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 DPYSL2Q16555 572 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
CDCP1-201ENST00000296129 TSSK3Q96PN8 268 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 EIF2B3Q9NR50 452 aaKnown RBP17.16■□□□□ 0.34
CDCP1-201ENST00000296129 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
CDCP1-201ENST00000296129 A8MUI8 341 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 H3BM21 787 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 ZNF618Q5T7W0 954 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DCAF12L1Q5VU92 463 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SYPL2Q5VXT5 272 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 TRIM40Q6P9F5 258 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 AAGABQ6PD74 315 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 OR52L1Q8NGH7 329 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 C2orf15Q8WU43 125 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 WRAP53Q9BUR4 548 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 MRPS26Q9BYN8 205 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CERS4Q9HA82 394 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 LRTM1Q9HBL6 345 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 A0A1B0GW55 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SIN3BO75182 1162 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 NFATC1O95644 943 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L2P0CJ85 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L3P0CJ86 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L4P0CJ87 422 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L5P0CJ88 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L6P0CJ89 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4L7P0CJ90 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 POLR2JP52435 117 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 PTSQ03393 145 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SLC39A4Q6P5W5 647 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SIDT2Q8NBJ9 832 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DUX4Q9UBX2 424 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SAMHD1Q9Y3Z3 626 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 OR10H1Q9Y4A9 318 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 IL1R2P27930 398 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 ARL13AQ5H913 290 aaPredicted RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 C17orf64Q86WR6 236 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SCLYQ96I15 445 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 HOPXQ9BPY8 73 aaPredicted RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 FAM192AQ9GZU8 254 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CLN6Q9NWW5 311 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 GSC2O15499 205 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 TRBC1P01850 177 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 EPHX1P07099 455 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CYP4F8P98187 520 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 FOLH1Q04609 750 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 FSTL1Q12841 308 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 TDRPQ86YL5 185 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DENND6AQ8IWF6 608 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CACTIN-AS1Q8N1I8 211 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 TLCD1Q96CP7 247 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 REXO4Q9GZR2 422 aaKnown RBP17.15■□□□□ 0.34
CDCP1-201ENST00000296129 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 IGSF9Q9P2J2 1179 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 ZNF780BQ9Y6R6 833 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 OR2AG2A6NM03 316 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CHURC1-FNTBB4DL54 471 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 PPEF2O14830 753 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 STX4Q12846 297 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 CPTPQ5TA50 214 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 DEF8Q6ZN54 512 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 SLC9A7Q96T83 725 aa17.15■□□□□ 0.34
CDCP1-201ENST00000296129 LOC100506127A0A0U1RQW1 187 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 PIPSLA2A3N6 862 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 IQCF5A8MTL0 148 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 SLC28A2O43868 658 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 TCF4P15884 667 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ELP6Q0PNE2 266 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 RALGDSQ12967 914 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 BROXQ5VW32 411 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 GDF6Q6KF10 455 aaPredicted RBP17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CERS6Q6ZMG9 384 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 SERPINA9Q86WD7 417 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CPSF7Q8N684 471 aaKnown RBP17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CLPTM1LQ96KA5 538 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ADI1Q9BV57 179 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 SSU72Q9NP77 194 aaKnown RBP17.14■□□□□ 0.33
CDCP1-201ENST00000296129 FKBPLQ9UIM3 349 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 MAGEL2Q9UJ55 1249 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 AGPSO00116 658 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 GNPDA1P46926 289 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ACLYP53396 1101 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CLCQ05315 142 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 NEK10Q6ZWH5 1172 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 IPPKQ9H8X2 491 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 N6AMT1Q9Y5N5 214 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 SNAP91O60641 907 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CDK14O94921 469 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms