RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PROCP04070 461 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 ATXN1P54253 815 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 UBXN11Q5T124 520 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 CYP2R1Q6VVX0 501 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TWNKQ96RR1 684 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 PCYT2Q99447 389 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 ADI1Q9BV57 179 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 EPS8L2Q9H6S3 715 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 CAB39Q9Y376 341 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 UBTFL6P0CB48 400 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 HCAR3P49019 387 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TMED10P49755 219 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 STX4Q12846 297 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 GDPD4Q6W3E5 623 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 CMTR2Q8IYT2 770 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 LRRC57Q8N9N7 239 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 SMOC2Q9H3U7 446 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 EIF2B3Q9NR50 452 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 NUDT4Q9NZJ9 180 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 GGA2Q9UJY4 613 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TEAD2Q15562 447 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC39A5Q6ZMH5 540 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 PCDH20Q8N6Y1 951 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 SETD9Q8NE22 299 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 APOL4Q9BPW4 351 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TSC22D4Q9Y3Q8 395 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TRAF6Q9Y4K3 522 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 CHURC1-FNTBB4DL54 471 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 WNT9AO14904 365 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 CFIP05156 583 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 OGNP20774 298 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC39A4Q6P5W5 647 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 PRR23BQ6ZRT6 265 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 MPP5Q8N3R9 675 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 BADQ92934 168 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 SMAD5Q99717 465 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 EPB41L4BQ9H329 900 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 CORO7P57737 925 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ADRM1Q16186 407 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 TRABD2AQ86V40 505 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZDHHC13Q8IUH4 622 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 MFSD3Q96ES6 412 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 POLR1BQ9H9Y6 1135 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SEMA3GQ9NS98 782 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 IRS2Q9Y4H2 1338 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 PDE9AO76083 593 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SMIM11AP58511 58 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 DEFA1P59665 94 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 DEFA3P59666 94 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 DRICH1Q6PGQ1 229 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 OSTM1Q86WC4 334 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 C10orf107Q8IVU9 208 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ADHFE1Q8IWW8 467 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SCAIQ8N9R8 606 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 FCRL5Q96RD9 977 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 IL36AQ9UHA7 158 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 STYXL1Q9Y6J8 313 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SERPINB7O75635 380 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 GOT2P00505 430 aaKnown RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 LINC00032P0C843 101 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ITCHQ96J02 903 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SH3GL2Q99962 352 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ANAPC2Q9UJX6 822 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 EDDM13A0A1B0GTR0 161 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ATP6V1B1P15313 513 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 DHPSP49366 369 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 MLLT6P55198 1093 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 MRPS35P82673 323 aaKnown RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 GHRHRQ02643 423 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 INAVAQ3KP66 663 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 WASHC2DQ5SRD0 308 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 PCBD2Q9H0N5 130 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC9A8Q9Y2E8 581 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 PRMT3O60678 531 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ALAS2P22557 587 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 CYP4F2P78329 520 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 SEMA5AQ13591 1074 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 KPNB1Q14974 876 aaKnown RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 CA9Q16790 459 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 BRAT1Q6PJG6 821 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 TTC29Q8NA56 475 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 OVCA2Q8WZ82 227 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 AP4S1Q9Y587 144 aa17.61■□□□□ 0.41
CDC42EP3-201ENST00000295324 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 CLDN4O14493 209 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 RFXANKO14593 260 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 CUZD1Q86UP6 607 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 PIGVQ9NUD9 493 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 EXD2Q9NVH0 621 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 WNT6Q9Y6F9 365 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 C9IYK1 514 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 CYBAP13498 195 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 MANFP55145 182 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms