RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 HSFY1Q96LI6 401 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 NODALQ96S42 347 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 ULBP1Q9BZM6 244 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 MARCH7Q9H992 704 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 OR12D3Q9UGF7 316 aa10.23□□□□□ -0.77
LMX1A-201ENST00000294816 AAR2Q9Y312 384 aaKnown RBP10.23□□□□□ -0.77
LMX1A-201ENST00000294816 UBXN8O00124 270 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 HBP1O60381 514 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TXNP10599 105 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 AKAP5P24588 427 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ARCN1P48444 511 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 CSRP3P50461 194 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 IL5RAQ01344 420 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 DGUOKQ16854 277 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ARL13BQ3SXY8 428 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 GJC2Q5T442 439 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 IRAK1BP1Q5VVH5 260 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 DCP1BQ8IZD4 617 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ATPAF2Q8N5M1 289 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 POC5Q8NA72 575 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 C2CD4AQ8NCU7 369 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 FIG4Q92562 907 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TSPAN17Q96FV3 270 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 GOLGA2P5Q9HBQ8 144 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 HOXC10Q9NYD6 342 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ANKMY1Q9P2S6 941 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ENPP5Q9UJA9 477 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 PCDHA9Q9Y5H5 950 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 SIP14410 1827 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TCRBV5S2A0A599 114 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 OR51F1A6NGY5 319 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TRIM64BA6NI03 449 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 NCF1BA6NI72 391 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 NCF1CA8MVU1 366 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 FAM47E-STBD1D6RA91 191 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 I6L893 689 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 GSTA4O15217 222 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 CDK14O94921 469 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 NCF1P14598 390 aaPredicted RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 PRKACGP22612 351 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 LEPRP48357 1165 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ATP4BP51164 291 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 MTPNP58546 118 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 UFM1P61960 85 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 RBM48Q5RL73 367 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ATAD3BQ5T9A4 648 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 SLC16A12Q6ZSM3 486 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 KIAA0408Q6ZU52 694 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 HEATR4Q86WZ0 1026 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 DCBLD1Q8N8Z6 715 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TEX37Q96LM6 180 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 C12orf42Q96LP6 360 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TKTL2Q9H0I9 626 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 AKIP1Q9NQ31 210 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ITM2CQ9NQX7 267 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 GDAP2Q9NXN4 497 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 AASSQ9UDR5 926 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 POLG2Q9UHN1 485 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 G3V2T6 193 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 SNPHO15079 494 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 SNX2O60749 519 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 UGT2B4P06133 528 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 FSHRP23945 695 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 MAP2K4P45985 399 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 CD47Q08722 323 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 FSCN1Q16658 493 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TTC23Q5W5X9 447 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 UNC93AQ86WB7 457 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 PLD3Q8IV08 490 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 LGI2Q8N0V4 545 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 LEMD2Q8NC56 503 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 RORBQ92753 470 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 OTUD5Q96G74 571 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 ITCHQ96J02 903 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 TRIM54Q9BYV2 358 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 WDCPQ9H6R7 721 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 VWA7Q9Y334 891 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 OAS3Q9Y6K5 1087 aaKnown RBP10.22□□□□□ -0.77
LMX1A-201ENST00000294816 U3KQV3 271 aa10.22□□□□□ -0.77
LMX1A-201ENST00000294816 CITO14578 2027 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 CCDC162PA2VCL2 907 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 YJEFN3A6XGL0 299 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 ZNF99A8MXY4 864 aaPredicted RBP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 SUPT3HB4E1H0 165 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 PSMD3O43242 534 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 ASNA1O43681 348 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 SOAT2O75908 522 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 ANXA9O76027 345 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 COL11A2P13942 1736 aaPredicted RBP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 ANK1P16157 1881 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 TGM1P22735 817 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 PIGAP37287 484 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 TRPC1P48995 793 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 NCS1P62166 190 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 CXCL9Q07325 125 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms