RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NRLP54845 237 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TPTEP56180 551 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 PHC1P78364 1004 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TMPRSS11BQ86T26 416 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 CD101Q93033 1021 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TSSK3Q96PN8 268 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 VAT1Q99536 393 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 CHCHD6Q9BRQ6 235 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 SPATA5L1Q9BVQ7 753 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 BRINP2Q9C0B6 783 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TMCO1Q9UM00 188 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 FAM240BA0A1B0GVZ2 78 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 SMCO3A2RU48 225 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TRBC1P01850 177 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 FASTKD3Q14CZ7 662 aaKnown RBP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 ALG11Q2TAA5 492 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 C1orf186Q6ZWK4 172 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 OAFQ86UD1 273 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 FAM156AQ8NDB6 213 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 JOSD2Q8TAC2 188 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 LENG9Q96B70 501 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 PRDM12Q9H4Q4 367 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 SEMA3GQ9NS98 782 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 CCL22O00626 93 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 PCCBP05166 539 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 FABP3P05413 133 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 PTPRAP18433 802 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 UGCGQ16739 394 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TBC1D21Q8IYX1 336 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 CADM2Q8N3J6 435 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 ATP13A3Q9H7F0 1226 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TRIM17Q9Y577 477 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 GSC2O15499 205 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 METTL18O95568 372 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 CLK3P49761 638 aaKnown RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 MBTD1Q05BQ5 628 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 DPYSQ14117 519 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 RAB43Q86YS6 212 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 OR5B17Q8NGF7 314 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 TOP1MTQ969P6 601 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 TRAF6Q9Y4K3 522 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PLOD2O00469 737 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 ALOX5P09917 674 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SNAPC1Q16533 368 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 FAM182AQ5T1J6 154 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 ARCQ7LC44 396 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SLC1A5Q15758 541 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 GLYATQ6IB77 296 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 RAVER1Q8IY67 606 aaKnown RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 CHST4Q8NCG5 386 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 EFHD2Q96C19 240 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 ZNF607Q96SK3 696 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PORCNQ9H237 461 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 ASB7Q9H672 318 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 EIF3KQ9UBQ5 218 aaKnown RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 HDAC3O15379 428 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 GMFBP60983 142 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 MPP1Q00013 466 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 GFOD2Q3B7J2 385 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SKA1Q96BD8 255 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 TRIM43Q96BQ3 446 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 S100PBPQ96BU1 408 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 KCTD15Q96SI1 283 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 LRRC19Q9H756 370 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 TIMM8BQ9Y5J9 83 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PRAMEF33A0A0G2JMD5 474 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PRAMEF10O60809 474 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 FTH1P02794 183 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 MSL3P1P0C860 447 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 NPR2P20594 1047 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 CDKL1Q00532 357 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 CA9Q16790 459 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PAOXQ6QHF9 649 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 PQLC1Q8N2U9 271 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 AADATQ8N5Z0 425 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 MED28Q9H204 178 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 FADS3Q9Y5Q0 445 aa16.06■□□□□ 0.16
SSRP1-202ENST00000293880 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 HSD3B2P26439 372 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 UGT1A5P35504 534 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ARRDC4Q8NCT1 418 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 OR2T12Q8NG77 320 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 NMUR2Q9GZQ4 415 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 IMP3Q9NV31 184 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ABHD2P08910 425 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 GIMD1P0DJR0 217 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ZNF132P52740 706 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms