RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ENO2P09104 434 aaPredicted RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 KCNA10Q16322 511 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 HIPK1Q86Z02 1210 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 NPAS4Q8IUM7 802 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 GPR152Q8TDT2 470 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 PNPLA8Q9NP80 782 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 UNCXA6NJT0 531 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 GABRDO14764 452 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 SEPT4O43236 478 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 CLDN9O95484 217 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 AMIGO2Q86SJ2 522 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 MPP5Q8N3R9 675 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 SGK2Q9HBY8 427 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 NEK6Q9HC98 313 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 MIOSQ9NXC5 875 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 TRPS1Q9UHF7 1281 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 RWDD3Q9Y3V2 267 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 LGR5O75473 907 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 BMP7P18075 431 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 CDK9P50750 372 aaKnown RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
PTCD1-201ENST00000292478 DLG2Q15700 870 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 RGS21Q2M5E4 152 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FUT10Q6P4F1 479 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 IKBIPQ70UQ0 350 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 HDDC2Q7Z4H3 204 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 UNC5BQ8IZJ1 945 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 ATAD1Q8NBU5 361 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FBXL18Q96ME1 805 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
PTCD1-201ENST00000292478 FGBP02675 491 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PAX7P23759 505 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 CSNK2BP67870 215 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 DGCR6Q14129 220 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 GPR158Q5T848 1215 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 CPA6Q8N4T0 437 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 MAB21L3Q8N8X9 362 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 AGPSO00116 658 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PRNPP04156 253 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 IL12RB1P42701 662 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 HCAR3P49019 387 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 DSC2Q02487 901 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 CLCQ05315 142 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 MTX3Q5HYI7 312 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 RACGAP1Q9H0H5 632 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 CLEC4MQ9H2X3 399 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 RHBGQ9H310 441 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 OR10H2O60403 315 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 NDUFS2O75306 463 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 TRBC1P01850 177 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 ESR1P03372 595 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 TPP2P29144 1249 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 OLR1P78380 273 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 NR1D2Q14995 579 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 ARL13AQ5H913 290 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 SULT1C3Q6IMI6 304 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 FSTL4Q6MZW2 842 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 TEX47Q8TBZ9 253 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 COL26A1Q96A83 441 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 GPR21Q99679 349 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PHPT1Q9NRX4 125 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 EXD2Q9NVH0 621 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 INTS7Q9NVH2 962 aaKnown RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PCDHGB3Q9Y5G1 929 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 NEDD8-MDP1E9PL57 170 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 WBP4O75554 376 aaKnown RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 NFATC1O95644 943 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 GPIP06744 558 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PTGER3P43115 390 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 GPD2P43304 727 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 SLC18A1P54219 525 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 PRMT2P55345 433 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 FITM2Q8N6M3 262 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 SRFBP1Q8NEF9 429 aaKnown RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 DNAJB8Q8NHS0 232 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 AP3S1Q92572 193 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 AARSD1Q9BTE6 412 aaKnown RBP12.73□□□□□ -0.37
PTCD1-201ENST00000292478 BTBD3Q9Y2F9 522 aa12.73□□□□□ -0.37
PTCD1-201ENST00000292478 ISM1B1AKI9 464 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MFN2O95140 757 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms