RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 HAUS2Q9NVX0 235 aa25.04■■□□□ 1.6
U2AF1-201ENST00000291552 VPS18Q9P253 973 aa25.04■■□□□ 1.6
U2AF1-201ENST00000291552 IGHV1OR21-1A0A087WYE8 117 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 ANKRD66B4E2M5 251 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 LIPCP11150 499 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 LY6DQ14210 128 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 GALNT3Q14435 633 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 CLPPQ16740 277 aaPredicted RBP25.03■■□□□ 1.6
U2AF1-201ENST00000291552 LYSMD3Q7Z3D4 306 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 SLC37A2Q8TED4 501 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 PMEPA1Q969W9 287 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 MLPHQ9BV36 600 aaPredicted RBP25.03■■□□□ 1.6
U2AF1-201ENST00000291552 NHEJ1Q9H9Q4 299 aaPredicted RBP25.03■■□□□ 1.6
U2AF1-201ENST00000291552 TMEM9Q9P0T7 183 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 TENM4Q6N022 2769 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 BSNQ9UPA5 3926 aa25.03■■□□□ 1.6
U2AF1-201ENST00000291552 APOL1O14791 398 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 ASMTLO95671 621 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 KRT1P04264 644 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 PTMSP20962 102 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 ARHGAP25P42331 645 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 ARSDP51689 593 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 LIMK2P53671 638 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 LRP8Q14114 963 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 B4GALNT4Q76KP1 1039 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 ZNF761Q86XN6 746 aaPredicted RBP25.02■■□□□ 1.6
U2AF1-201ENST00000291552 SFRP1Q8N474 314 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 TADA1Q96BN2 335 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 IMP4Q96G21 291 aaKnown RBP25.02■■□□□ 1.6
U2AF1-201ENST00000291552 FAM83DQ9H4H8 585 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 ZNHIT6Q9NWK9 470 aaKnown RBP25.02■■□□□ 1.6
U2AF1-201ENST00000291552 HYOU1Q9Y4L1 999 aa25.02■■□□□ 1.6
U2AF1-201ENST00000291552 TLN1Q9Y490 2541 aaKnown RBP25.02■■□□□ 1.6
U2AF1-201ENST00000291552 BOD1L1Q8NFC6 3051 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 TRBV23OR9-2A0A075B6M9 112 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 HGSO14964 777 aaPredicted RBP25.01■■□□□ 1.59
U2AF1-201ENST00000291552 FASLGP48023 281 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 AP1B1Q10567 949 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 SQSTM1Q13501 440 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 PEX6Q13608 980 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.01■■□□□ 1.59
U2AF1-201ENST00000291552 VASH2Q86V25 355 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 DTX1Q86Y01 620 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 RHOT2Q8IXI1 618 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 WDR70Q9NW82 654 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 PKD2L2Q9NZM6 624 aa25.01■■□□□ 1.59
U2AF1-201ENST00000291552 A6NCN8 305 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 PIRTP0C851 137 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 NOP2P46087 812 aaKnown RBP25■■□□□ 1.59
U2AF1-201ENST00000291552 BIRC2Q13490 618 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 LRRC38Q5VT99 294 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 OR4D9Q8NGE8 314 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 TRAF3IP1Q8TDR0 691 aaPredicted RBP25■■□□□ 1.59
U2AF1-201ENST00000291552 RNF25Q96BH1 459 aaPredicted RBP25■■□□□ 1.59
U2AF1-201ENST00000291552 CCDC42Q96M95 316 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 AGAP3Q96P47 875 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 ARFGAP3Q9NP61 516 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 KCNK4Q9NYG8 393 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 TBC1D29Q9UFV1 150 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 ZNHIT2Q9UHR6 403 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 KCNK6Q9Y257 313 aa25■■□□□ 1.59
U2AF1-201ENST00000291552 THRAP10827 490 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 FGF3P11487 239 aaPredicted RBP24.99■■□□□ 1.59
U2AF1-201ENST00000291552 PLA2G2AP14555 144 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 WT1P19544 449 aaPredicted RBP24.99■■□□□ 1.59
U2AF1-201ENST00000291552 MPSTP25325 297 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 DYNLT1P63172 113 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 PDK1Q15118 436 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 MFSD7Q6UXD7 560 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 CHST15Q7LFX5 561 aaPredicted RBP24.99■■□□□ 1.59
U2AF1-201ENST00000291552 KDELC2Q7Z4H8 507 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 RFX6Q8HWS3 928 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 GPR26Q8NDV2 337 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 SEPT10Q9P0V9 454 aa24.99■■□□□ 1.59
U2AF1-201ENST00000291552 ZNF106Q9H2Y7 1883 aaKnown RBP24.98■■□□□ 1.59
U2AF1-201ENST00000291552 RGSL1A5PLK6 1076 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 ACP5P13686 325 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 TCEAL1Q15170 157 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 ZNF648Q5T619 568 aaPredicted RBP24.98■■□□□ 1.59
U2AF1-201ENST00000291552 ALS2CLQ60I27 953 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 RNF214Q8ND24 703 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 SPATA22Q8NHS9 363 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 CCHCR1Q8TD31 782 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 ADGRE3Q9BY15 652 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 B3GNT4Q9C0J1 378 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 SLC25A51Q9H1U9 297 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 TSPY26PQ9H489 355 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 SHOC2Q9UQ13 582 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 ADGRG1Q9Y653 693 aa24.98■■□□□ 1.59
U2AF1-201ENST00000291552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-201ENST00000291552 TBX2Q13207 712 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-201ENST00000291552 TRA2AQ13595 282 aaKnown RBP eCLIP24.97■■□□□ 1.59
U2AF1-201ENST00000291552 TAZQ16635 292 aa24.97■■□□□ 1.59
U2AF1-201ENST00000291552 NT5DC3Q86UY8 548 aa24.97■■□□□ 1.59
U2AF1-201ENST00000291552 ZFYVE1Q9HBF4 777 aa24.97■■□□□ 1.59
U2AF1-201ENST00000291552 ATXN10Q9UBB4 475 aa24.97■■□□□ 1.59
U2AF1-201ENST00000291552 NFKBIL1Q9UBC1 381 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-201ENST00000291552 SAE1Q9UBE0 346 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-201ENST00000291552 ZNF711Q9Y462 761 aa24.97■■□□□ 1.59
U2AF1-201ENST00000291552 SPTA1P02549 2419 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms