RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 STX11O75558 287 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 ESR1P03372 595 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 ALPPL2P10696 532 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 KCNE1P15382 129 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 INAQ16352 499 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 DGKKQ5KSL6 1271 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CAMK1DQ8IU85 385 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 TERB1Q8NA31 727 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 BHLHE22Q8NFJ8 381 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 FKBPLQ9UIM3 349 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 PPIEQ9UNP9 301 aaKnown RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 TCRBV7S2A1N4TA0A589 114 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SNAI1O95863 264 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 BPGMP07738 259 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SLC6A2P23975 617 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 ITPKBP27987 946 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SCNN1AP37088 669 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 RFTN2Q52LD8 501 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 ESRP1Q6NXG1 681 aaKnown RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 TMEM220Q6QAJ8 160 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 OFCC1Q8IZS5 231 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CLEC4CQ8WTT0 213 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CENPIQ92674 756 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SMIM31A0A1B0GVY4 71 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SLC22A3O75751 556 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ALAS2P22557 587 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DGKEP52429 567 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SPIRE1Q08AE8 756 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 CCNYL2Q5T2Q4 361 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ADAMTS15Q8TE58 950 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SLC38A3Q99624 504 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DDX18Q9NVP1 670 aaKnown RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DTLQ9NZJ0 730 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 CNTN3Q9P232 1028 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 CLDN4O14493 209 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ZMPSTE24O75844 475 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 TRBC1P01850 177 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 GNSP15586 552 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 CHRNB2P17787 502 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 NSG1P42857 185 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 PTGER3P43115 390 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 KLHL1Q9NR64 748 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 POLR3HQ9Y535 204 aaPredicted RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SLC7A4O43246 635 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 LCA5LO95447 670 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 GJA1P17302 382 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 BUD31P41223 144 aaPredicted RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ECT2LQ008S8 904 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 MINDY4Q4G0A6 757 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 UBXN11Q5T124 520 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 TTC23Q5W5X9 447 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF514Q96K75 400 aaPredicted RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 S100A13Q99584 98 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 MECRQ9BV79 373 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 NEK6Q9HC98 313 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 TLR9Q9NR96 1032 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF490Q9ULM2 529 aaPredicted RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 A0A1B0GW55 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 TM7SF2O76062 418 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L2P0CJ85 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L3P0CJ86 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L4P0CJ87 422 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L5P0CJ88 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L6P0CJ89 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4L7P0CJ90 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SLC11A1P49279 550 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ATXN1P54253 815 aaKnown RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 CDC42P60953 191 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 SYPL2Q5VXT5 272 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 NRSN1Q8IZ57 195 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF461Q8TAF7 563 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 POP5Q969H6 163 aaKnown RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 NXNL1Q96CM4 212 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 REXO5Q96IC2 774 aaKnown RBP18.43■□□□□ 0.54
PCDH1-201ENST00000287008 LPIN3Q9BQK8 851 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 DUX4Q9UBX2 424 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 GABRQQ9UN88 632 aa18.43■□□□□ 0.54
PCDH1-201ENST00000287008 FAM25AB3EWG3 89 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 FAM25CB3EWG5 89 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 FAM25GB3EWG6 89 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 OR6B1O95007 311 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 UNGP13051 313 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 CSKP41240 450 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 PTSQ03393 145 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 GPR17Q13304 367 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SPESP1Q6UW49 350 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF296Q8WUU4 475 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SIPA1Q96FS4 1042 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 LRTM1Q9HBL6 345 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SNED1Q8TER0 1413 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 DDX6P26196 483 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 KIR3DL1P43629 444 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 ASMTP46597 345 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 LIMK2P53671 638 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 DPYSL2Q16555 572 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 CARD16Q5EG05 197 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 MBLAC2Q68D91 279 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 LMLNQ96KR4 655 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms